myRT

myRT report for GCA_005887165.1_ASM588716v1

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Seq: PNDE01000148.1 (12982 bp)
Overview 1 RT 1: 117-3231 bp Neighborhood of RT #1 [117, 3231] RVT-UG8 MhpC Feature: gene Location: 117-1709 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 219-666 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21 9-666 bp Feature: gene Location: 1940-2752 bp Feature: domain Description: MhpC Location: 2021-2732 bp Feature: domain Description: MhpC Location: 2021 -2732 bp Feature: gene Location: 2893-3231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, MhpC (COG0596)

Seq: PNDE01000125.1 (32547 bp)
Overview 1 RT 1: 24553-26544 bp Neighborhood of RT #1 [24553, 26549] RVT-GII GIIM PHA02517 Feature: gene Location: 24553-24720 bp Feature: gene Location: 24900-25067 bp Feature: gene Location: 25074-25268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25080-25236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5080-2 52 36 bp Feature: gene Location: 25744-26163 bp Feature: domain Description: GIIM Note: maturase Location: 25795-25978 bp Feature: domain Description: GIIM Note: maturase Location: 2 5795-2 5978 bp Feature: gene Location: 26385-26549 bp Feature: domain Description: PHA02517 Location: 26400-26544 bp Feature: domain Description: PHA02 517 Location: 2 6400-2 6544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PNDE01000096.1 (36438 bp)
Overview 1 RT 1: 32027-36339 bp Neighborhood of RT #1 [32027, 36339] MmsB sbcB RVT-UG3 Feature: gene Location: 32027-32908 bp Feature: domain Description: MmsB Location: 32039-32888 bp Feature: domain Description: MmsB Location: 3 203 9-3 2888 bp Feature: gene Location: 33120-34565 bp Feature: domain Description: sbcB Note: exonuclease Location: 33135-34560 bp Feature: domain Description: sbcB Note: exonuclease Location: 3 3 13 5-3 4560 bp Feature: gene Location: 34803-35966 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 35058-35520 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3 5058-3 5520 bp Feature: gene Location: 35956-36339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MmsB (COG2084), sbcB (PRK11779), RVT-UG3