myRT

myRT report for GCA_005887185.1_ASM588718v1

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Seq: PNDG01000017.1 (23292 bp)
Overview 1 RT 1: 5770-8314 bp 2 RT 2: 13193-18365 bp Neighborhood of RT #1 [5770, 8325] DUF4345 RVT-GII DUF4166 DMQH Neighborhood of RT #2 [13193, 18365] AlpA RVT_N RVT-GII GIIM Feature: gene Location: 5770-6231 bp Feature: gene Location: 6228-6575 bp Feature: domain Description: DUF4345 Location: 6249-6561 bp Feature: domain Description: DUF4345 Location: 6249-6561 bp Feature: gene Location: 6960-7145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6969-7143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6969-71 43 bp Feature: gene Location: 7203-7832 bp Feature: domain Description: DUF4166 Location: 7317-7797 bp Feature: domain Description: DUF41 66 Location: 731 7-7797 bp Feature: gene Location: 7819-8325 bp Feature: domain Description: DMQH Location: 7834-8314 bp Feature: domain Description: DMQH Location: 7834-831 4 bp Feature: gene Location: 13193-13375 bp Feature: domain Description: AlpA Location: 13196-13367 bp Feature: domain Description: AlpA Location: 1 31 96-1 3367 bp Feature: gene Location: 14121-14288 bp Feature: gene Location: 14266-15738 bp Feature: domain Description: RVT_N Location: 14314-14557 bp Feature: domain Description: RVT_N Location: 1 431 4-1 4557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14602-15229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4602-1 5229 bp Feature: domain Description: GIIM Note: maturase Location: 15289-15514 bp Feature: domain Description: GIIM Note: maturase Location: 1 5289-1 551 4 bp Feature: gene Location: 15937-16485 bp Feature: gene Location: 16668-18365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4345 (pfam14248), RVT-GII, DUF4166 (pfam13761), DMQH (cd01042), AlpA (COG3311), RVT_N (pfam13655), GIIM (pfam08388)