myRT

myRT report for GCA_005887355.1_ASM588735v1

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Seq: PNBX01000048.1 (193405 bp)
Overview 1 RT 1: 84774-94591 bp Neighborhood of RT #1 [84774, 94596] DUF45 COG0610 RVT-UG5 RMtype1_S_EcoJA69PI-TRD1-CR1_like RMtype1_S_EcoJA69PI-TRD1-CR1_like HsdM Feature: gene Location: 84774-85601 bp Feature: domain Description: DUF45 Location: 84927-85575 bp Feature: domain Description: DUF45 Location: 84927-85575 bp Feature: gene Location: 85607-88900 bp Feature: domain Description: COG0610 Location: 85817-88535 bp Feature: domain Description: COG061 0 Location: 8581 7-88535 bp Feature: gene Location: 88914-91838 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 89388-89883 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 89388-89883 bp Feature: gene Location: 91854-93086 bp Feature: domain Description: RMtype1_S_EcoJA69PI-TRD1-CR1_like Location: 92010-92436 bp Feature: domain Description: RMtype1 _S_EcoJA69PI-TRD1 -CR1 _like Location: 9201 0-92436 bp Feature: domain Description: RMtype1_S_EcoJA69PI-TRD1-CR1_like Location: 92505-93060 bp Feature: domain Description: RMtype1 _S_EcoJA69PI-TRD1 -CR1 _like Location: 92505-93060 bp Feature: gene Location: 93076-94596 bp Feature: domain Description: HsdM Location: 93097-94591 bp Feature: domain Description: HsdM Location: 93097-94591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5, RMtype1_S_EcoJA69PI-TRD1-CR1_like (cd17273), HsdM (COG0286)

Seq: PNBX01000106.1 (23728 bp)
Overview 1 RT 1: 18298-23597 bp Neighborhood of RT #1 [18298, 23725] groEL RVT_N RVT-GII GIIM HNH LRR_4 LRR_4 LRR_4 Feature: gene Location: 18298-19947 bp Feature: domain Description: groEL Location: 18304-19930 bp Feature: domain Description: groEL Location: 18304-19930 bp Feature: gene Location: 20677-20937 bp Feature: gene Location: 21006-22697 bp Feature: domain Description: RVT_N Location: 21078-21312 bp Feature: domain Description: RVT_N Location: 2 1078-2 1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21366-22011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1366-2 2 011 bp Feature: domain Description: GIIM Note: maturase Location: 22065-22299 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 065-2 2 2 99 bp Feature: domain Description: HNH Note: nucleases Location: 22539-22674 bp Feature: domain Description: HNH Note: nucleases Location: 2 2 539-2 2 674 bp Feature: gene Location: 22717-22962 bp Feature: gene Location: 23141-23725 bp Feature: domain Description: LRR_4 Location: 23183-23294 bp Feature: domain Description: LRR_4 Location: 2 3183-2 32 94 bp Feature: domain Description: LRR_4 Location: 23375-23474 bp Feature: domain Description: LRR_4 Location: 2 3375-2 3474 bp Feature: domain Description: LRR_4 Location: 23504-23597 bp Feature: domain Description: LRR_4 Location: 2 3504-2 3597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LRR_4 (pfam12799)