myRT

myRT report for GCA_005930575.1_ASM593057v1

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Seq: RWKC01000001.1 (329413 bp)
Overview 1 RT 1: 24581-32828 bp Neighborhood of RT #1 [24581, 32878] COG3178 RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 24581-25606 bp Feature: domain Description: COG3178 Location: 24599-25589 bp Feature: domain Description: COG31 78 Location: 24599-25589 bp Feature: gene Location: 26421-26585 bp Feature: gene Location: 26909-28618 bp Feature: domain Description: RVT_N Location: 26966-27209 bp Feature: domain Description: RVT_N Location: 26966-27209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27254-27890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27254-27890 bp Feature: domain Description: GIIM Note: maturase Location: 27941-28175 bp Feature: domain Description: GIIM Note: maturase Location: 27941 -281 75 bp Feature: domain Description: HNH Note: nucleases Location: 28427-28565 bp Feature: domain Description: HNH Note: nucleases Location: 28427-28565 bp Feature: gene Location: 28762-31563 bp Feature: domain Description: LptD Location: 29101-31546 bp Feature: domain Description: LptD Location: 291 01 -31 546 bp Feature: gene Location: 31538-32878 bp Feature: domain Description: PRK10770 Location: 31622-32828 bp Feature: domain Description: PRK1 0770 Location: 31 622-32828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: RWKC01000049.1 (45586 bp)
Overview 1 RT 1: 15195-20750 bp Neighborhood of RT #1 [15195, 20750] NTP-PPase_RS21-C6_like RVT-UG16 Feature: gene Location: 15195-15578 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 15255-15519 bp Feature: domain Description: NTP-PPase_RS2 1-C6_like Location: 152 55-15519 bp Feature: gene Location: 16219-17685 bp Feature: gene Location: 17791-19203 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 18082-18490 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 18082 -18490 bp Feature: gene Location: 19874-20023 bp Feature: gene Location: 20370-20750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_RS21-C6_like (cd11537), RVT-UG16

Seq: RWKC01000090.1 (16929 bp)
Overview 1 RT 1: 4973-8188 bp Neighborhood of RT #1 [4973, 8188] TnpB_IS66 RVT-GII RVT-GII Feature: gene Location: 4973-5308 bp Feature: domain Description: TnpB_IS66 Location: 4991-5279 bp Feature: domain Description: TnpB_IS66 Location: 4991-5279 bp Feature: gene Location: 5396-5569 bp Feature: gene Location: 5777-6766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6491-6761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6491-6761 bp Feature: gene Location: 6821-7462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6824-7181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6824-7181 bp Feature: gene Location: 7503-7646 bp Feature: gene Location: 7841-8188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII