myRT

myRT report for GCA_006130115.1_ASM613011v1

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Seq: RZMF01000126.1 (11470 bp)
Overview 1 RT 1: 2057-5351 bp Neighborhood of RT #1 [2057, 5365] RVT-GII PRK10276 Feature: gene Location: 2057-2272 bp Feature: gene Location: 2539-2769 bp Feature: gene Location: 3003-4538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3408-4146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3408-41 46 bp Feature: gene Location: 4589-4822 bp Feature: gene Location: 4940-5365 bp Feature: domain Description: PRK10276 Location: 4943-5351 bp Feature: domain Description: PRK1 0276 Location: 4943-5351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RZMF01000313.1 (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RZMF01000055.1 (27943 bp)
Overview 1 RT 1: 7304-10357 bp Neighborhood of RT #1 [7304, 10357] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7304-7726 bp Feature: domain Description: DUF1380 Location: 7307-7601 bp Feature: domain Description: DUF13 80 Location: 73 07-7601 bp Feature: gene Location: 7723-7914 bp Feature: gene Location: 8228-9895 bp Feature: domain Description: RVT_N Location: 8276-8513 bp Feature: domain Description: RVT_N Location: 8276-8513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8564-9206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8564-9206 bp Feature: domain Description: GIIM Note: maturase Location: 9257-9491 bp Feature: domain Description: GIIM Note: maturase Location: 9257-9491 bp Feature: domain Description: HNHc Note: nucleases Location: 9701-9860 bp Feature: domain Description: HNHc Note: nucleases Location: 9701-9860 bp Feature: gene Location: 9932-10078 bp Feature: gene Location: 10175-10357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RZMF01000024.1 (59906 bp)
Overview 1 RT 1: 54666-59830 bp Neighborhood of RT #1 [54666, 59830] AAA_15 RVT-Retrons Feature: gene Location: 54666-54971 bp Feature: gene Location: 55850-58126 bp Feature: domain Description: AAA_15 Location: 55883-56891 bp Feature: domain Description: AAA_15 Location: 55883-56891 bp Feature: gene Location: 58241-59341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58421-58955 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 584 21-58955 bp Feature: gene Location: 59594-59830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: RZMF01000118.1 (12378 bp)
Overview 1 RT 1: 4718-11586 bp Neighborhood of RT #1 [4718, 11588] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 4718-5446 bp Feature: domain Description: FimC Location: 4751-5429 bp Feature: domain Description: FimC Location: 475 1-5 429 bp Feature: gene Location: 5478-8087 bp Feature: domain Description: FimD Location: 5535-8076 bp Feature: domain Description: FimD Location: 5 5 35 -8076 bp Feature: gene Location: 8087-10165 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8495-8939 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8495 -8939 bp Feature: gene Location: 10222-10662 bp Feature: domain Description: Integrase_1 Location: 10228-10444 bp Feature: domain Description: Integrase_1 Location: 10228-10444 bp Feature: gene Location: 10923-11588 bp Feature: domain Description: INT_P4_C Location: 11028-11586 bp Feature: domain Description: INT_P4_C Location: 11028-115 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)