myRT

myRT report for GCA_006212005.1_ASM621200v1

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Seq: SDAZ01000111.1 Sulfurovum sp. isolate MAG_Cluster_2 NODE_194_length_6177_cov_5.77835, whole genome shotgun sequence (6177 bp)
Overview 1 RT 1: 1-3729 bp Neighborhood of RT #1 [1, 3962] Transpeptidase RVT-Retrons YdjM Feature: gene Location: 1-504 bp Feature: domain Description: Transpeptidase Location: 16-457 bp Feature: domain Description: Transpeptidase Location: 1 6-457 bp Feature: gene Location: 731-2437 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 827-1409 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 827-1 409 bp Feature: gene Location: 2469-3119 bp Feature: gene Location: 3237-3962 bp Feature: domain Description: YdjM Location: 3240-3729 bp Feature: domain Description: YdjM Location: 3240-3729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transpeptidase (pfam00905), YdjM (pfam04307), RVT-Retrons

Seq: SDAZ01000199.1 Sulfurovum sp. isolate MAG_Cluster_2 NODE_688_length_2221_cov_17.3706, whole genome shotgun sequence (2221 bp)
Overview 1 RT 1: 659-1943 bp Neighborhood of RT #1 [659, 2134] RVT_N RVT-GII GIIM Feature: gene Location: 659-2134 bp Feature: RT Description: RVT_N Location: 701-944 bp Feature: RT Description: RVT_N Location: 701-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 995-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 995-1655 bp Feature: domain Description: GIIM Note: maturase Location: 1712-1943 bp Feature: domain Description: GIIM Note: maturase Location: 1712 -1943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)