myRT

myRT report for GCA_006226375.1_ASM622637v1

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Seq: SBHC01000053.1 Deltaproteobacteria bacterium isolate M3003 scaffold_110_1, whole genome shotgun sequence (72211 bp)
Overview 1 RT 1: 9539-15468 bp Neighborhood of RT #1 [9539, 15468] PTZ00075 RVT-Retrons RVT-Retrons Feature: gene Location: 9539-10981 bp Feature: domain Description: PTZ00075 Location: 9575-10979 bp Feature: domain Description: PTZ00075 Location: 9575-1 0979 bp Feature: gene Location: 11226-11858 bp Feature: gene Location: 12164-14323 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12371-12992 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2371 -1 2992 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13415-14006 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 341 5-1 4006 bp Feature: gene Location: 14405-14704 bp Feature: gene Location: 14845-15468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PTZ00075 (Adenosylhomocysteinase; Provisional)

Seq: SBHC01000079.1 Deltaproteobacteria bacterium isolate M3003 scaffold_2_1, whole genome shotgun sequence (403750 bp)
Overview 1 RT 1: 37800-44856 bp Neighborhood of RT #1 [37800, 44856] TIG TIG ZnMc_pappalysin_like RVT_N RVT-GII GIIM HNHc MCPsignal Feature: gene Location: 37800-38651 bp Feature: domain Description: TIG Location: 38133-38340 bp Feature: domain Description: TIG Location: 38133-38340 bp Feature: domain Description: TIG Location: 38391-38607 bp Feature: domain Description: TIG Location: 38391-38607 bp Feature: gene Location: 38901-40487 bp Feature: domain Description: ZnMc_pappalysin_like Location: 39717-40017 bp Feature: domain Description: ZnMc_pappalysin_like Location: 39717-40017 bp Feature: gene Location: 41425-43131 bp Feature: RT Description: RVT_N Location: 41476-41719 bp Feature: RT Description: RVT_N Location: 41476-41719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41764-42397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41764-42 397 bp Feature: domain Description: GIIM Note: maturase Location: 42454-42685 bp Feature: domain Description: GIIM Note: maturase Location: 42 454-42 685 bp Feature: domain Description: HNHc Note: nucleases Location: 42913-43072 bp Feature: domain Description: HNHc Note: nucleases Location: 42 913-43072 bp Feature: gene Location: 43318-44613 bp Feature: domain Description: MCPsignal Location: 43786-43936 bp Feature: domain Description: MCPsignal Location: 43786-43936 bp Feature: gene Location: 44701-44856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIG, ZnMc_pappalysin_like (cd04275), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), MCPsignal (pfam00015)

Seq: SBHC01000028.1 Deltaproteobacteria bacterium isolate M3003 scaffold_44_1, whole genome shotgun sequence (121542 bp)
Overview 1 RT 1: 83183-91619 bp Neighborhood of RT #1 [83183, 91627] YycJ-like_MBL-fold RVT-Retrons YdiL UPF0547 STKc_PknB_like YfmG Feature: gene Location: 83183-84037 bp Feature: domain Description: YycJ-like_MBL-fold Location: 83204-83768 bp Feature: domain Description: YycJ-like_MBL-fold Location: 83 204-83 768 bp Feature: gene Location: 84278-86140 bp Feature: gene Location: 86198-87541 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86675-87293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86675-87293 bp Feature: gene Location: 87736-88404 bp Feature: domain Description: YdiL Location: 87775-88327 bp Feature: domain Description: YdiL Location: 87775-883 27 bp Feature: gene Location: 88775-91627 bp Feature: domain Description: UPF0547 Location: 88784-88853 bp Feature: domain Description: UPF0547 Location: 88784-88853 bp Feature: domain Description: STKc_PknB_like Location: 88961-89696 bp Feature: domain Description: STKc_PknB_like Location: 88961-89696 bp Feature: domain Description: YfmG Location: 91202-91619 bp Feature: domain Description: YfmG Location: 91202-91619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YycJ-like_MBL-fold (cd07733), RVT-Retrons, YdiL (COG1266), UPF0547 (pfam10571), STKc_PknB_like (cd14014), YfmG (COG1262)