myRT

myRT report for GCA_006234195.1_ASM623419v1

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Seq: SQFP01000027.1 (111105 bp)
Overview 1 RT 1: 22161-28404 bp Neighborhood of RT #1 [22161, 28541] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22161-22427 bp Feature: domain Description: Phage_integrase Location: 22227-22323 bp Feature: domain Description: Phage_integrase Location: 22227-22323 bp Feature: gene Location: 22510-22980 bp Feature: gene Location: 23327-26536 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23855-24344 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23855-24344 bp Feature: domain Description: nitrilase Location: 25850-26447 bp Feature: domain Description: nitrilase Location: 25850-26447 bp Feature: gene Location: 26831-27634 bp Feature: domain Description: AbiEi_3_N Location: 26864-27125 bp Feature: domain Description: AbiEi_3_N Location: 26864-271 25 bp Feature: domain Description: AbiEi_3 Location: 27137-27593 bp Feature: domain Description: AbiEi_3 Location: 271 37-27593 bp Feature: gene Location: 27621-28541 bp Feature: domain Description: AbiEii Location: 27663-28404 bp Feature: domain Description: AbiEii Location: 27663-28404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: SQFP01000106.1 (1042 bp)
Overview 1 RT 1: 2-848 bp Neighborhood of RT #1 [2, 1039] RVT-GII GIIM Feature: gene Location: 2-1039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38-575 bp Feature: domain Description: GIIM Note: maturase Location: 650-848 bp Feature: domain Description: GIIM Note: maturase Location: 650-848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SQFP01000017.1 (10086 bp)
Overview 1 RT 1: 2987-6710 bp Neighborhood of RT #1 [2987, 6715] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 2987-3193 bp Feature: gene Location: 3527-3736 bp Feature: gene Location: 3871-5772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4138-4969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 8-4969 bp Feature: domain Description: Intron_maturas2 Location: 5083-5341 bp Feature: domain Description: Intron_maturas2 Location: 5083 -53 41 bp Feature: domain Description: HNHc Note: nucleases Location: 5515-5677 bp Feature: domain Description: HNHc Note: nucleases Location: 5515-5677 bp Feature: gene Location: 5967-6419 bp Feature: domain Description: PRK13732 Location: 5973-6417 bp Feature: domain Description: PRK13 73 2 Location: 5973 -6417 bp Feature: gene Location: 6482-6715 bp Feature: domain Description: DUF905 Location: 6512-6710 bp Feature: domain Description: DUF905 Location: 6512-6710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)