myRT

myRT report for GCA_006236555.1_ASM623655v1

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Seq: SQHZ01000064.1 (5242 bp)
Overview 1 RT 1: 381-3569 bp Neighborhood of RT #1 [381, 3574] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 381-590 bp Feature: gene Location: 725-2626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 992-1823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 992-1 823 bp Feature: domain Description: Intron_maturas2 Location: 1937-2195 bp Feature: domain Description: Intron_maturas2 Location: 1 937-21 95 bp Feature: domain Description: HNHc Note: nucleases Location: 2369-2531 bp Feature: domain Description: HNHc Note: nucleases Location: 2369-2531 bp Feature: gene Location: 2821-3273 bp Feature: domain Description: PRK13732 Location: 2827-3271 bp Feature: domain Description: PRK1 3732 Location: 2827-3271 bp Feature: gene Location: 3341-3574 bp Feature: domain Description: DUF905 Location: 3371-3569 bp Feature: domain Description: DUF905 Location: 3371 -3569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: SQHZ01000076.1 (1794 bp)
Overview 1 RT 1: 2-1447 bp Neighborhood of RT #1 [2, 1692] RVT-GII GIIM Feature: gene Location: 2-145 bp Feature: gene Location: 169-1692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 -1174 bp Feature: domain Description: GIIM Note: maturase Location: 1249-1447 bp Feature: domain Description: GIIM Note: maturase Location: 12 49-1447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SQHZ01000183.1 (4261 bp)
Overview 1 RT 1: 828-3955 bp Neighborhood of RT #1 [828, 3955] Arm-DNA-bind_3 RVT-Retrons Feature: gene Location: 828-1130 bp Feature: domain Description: Arm-DNA-bind_3 Location: 837-1089 bp Feature: domain Description: Arm-DNA-bind_3 Location: 83 7-1089 bp Feature: gene Location: 1314-1559 bp Feature: gene Location: 1585-2517 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1687-2281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1687-2281 bp Feature: gene Location: 2519-3505 bp Feature: gene Location: 3806-3955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons

Seq: SQHZ01000133.1 (66572 bp)
Overview 1 RT 1: 61811-66569 bp Neighborhood of RT #1 [61811, 66569] PBP2_CrgA_like_5 RVT-UG8 RVT-UG3 Feature: gene Location: 61811-62221 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 61883-62195 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 61883-62195 bp Feature: gene Location: 62385-62540 bp Feature: gene Location: 62763-64781 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 63336-63789 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 63336-63789 bp Feature: gene Location: 64772-66049 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 65060-65555 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 65060-65555 bp Feature: gene Location: 66444-66569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_CrgA_like_5 (cd08474), RVT-UG8, RVT-UG3