myRT

myRT report for GCA_006237005.1_ASM623700v1

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Seq: SQKN01000107.1 (59173 bp)
Overview 1 RT 1: 18495-22301 bp Neighborhood of RT #1 [18495, 22306] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 18495-18731 bp Feature: gene Location: 19113-19322 bp Feature: gene Location: 19457-21358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19724-20555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9724-20555 bp Feature: domain Description: Intron_maturas2 Location: 20669-20927 bp Feature: domain Description: Intron_maturas2 Location: 20669-20927 bp Feature: domain Description: HNHc Note: nucleases Location: 21101-21263 bp Feature: domain Description: HNHc Note: nucleases Location: 21 1 01 -21 263 bp Feature: gene Location: 21553-22005 bp Feature: domain Description: PRK13732 Location: 21559-22003 bp Feature: domain Description: PRK1 3732 Location: 21 559-22003 bp Feature: gene Location: 22073-22306 bp Feature: domain Description: DUF905 Location: 22103-22301 bp Feature: domain Description: DUF905 Location: 221 03-22301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: SQKN01000113.1 (1794 bp)
Overview 1 RT 1: 103-1793 bp Neighborhood of RT #1 [103, 1793] RVT-GII GIIM Feature: gene Location: 103-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: gene Location: 1650-1793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SQKN01000019.1 (3935 bp)
Overview 1 RT 1: 2-3067 bp Neighborhood of RT #1 [2, 3108] RVT-Retrons Arm-DNA-bind_3 Feature: gene Location: 2-130 bp Feature: gene Location: 431-1417 bp Feature: gene Location: 1419-2351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1521-2115 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1521-2115 bp Feature: gene Location: 2377-2622 bp Feature: gene Location: 2806-3108 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2815-3067 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2815-3 067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356)

Seq: SQKN01000044.1 (92145 bp)
Overview 1 RT 1: 86776-89689 bp Neighborhood of RT #1 [86776, 90681] XdhC PBP2_CrgA_like_5 RVT-UG8 Feature: gene Location: 86776-87732 bp Feature: domain Description: XdhC Location: 86854-87709 bp Feature: domain Description: XdhC Location: 86854 -87709 bp Feature: gene Location: 87711-88121 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 87783-88095 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 87783-88095 bp Feature: gene Location: 88663-90681 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 89236-89689 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 89236-89689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8