myRT

myRT report for GCA_006238625.1_ASM623862v1

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Seq: SQBI01000220.1 (25171 bp)
Overview 1 RT 1: 9116-12755 bp Neighborhood of RT #1 [9116, 12922] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 9116-9418 bp Feature: domain Description: InsE Location: 9155-9404 bp Feature: domain Description: InsE Location: 91 55-9404 bp Feature: gene Location: 9474-9899 bp Feature: domain Description: PHA02517 Location: 9498-9834 bp Feature: domain Description: PHA0251 7 Location: 9498-9834 bp Feature: gene Location: 10491-12014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10764-11496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0764-1 1 496 bp Feature: domain Description: GIIM Note: maturase Location: 11571-11769 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 571 -1 1 769 bp Feature: gene Location: 12209-12343 bp Feature: gene Location: 12509-12922 bp Feature: domain Description: COG2085 Location: 12608-12755 bp Feature: domain Description: COG2085 Location: 1 2608-1 2755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: SQBI01000246.1 (159847 bp)
Overview 1 RT 1: 129509-135540 bp Neighborhood of RT #1 [129509, 135540] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 129509-130429 bp Feature: domain Description: AbiEii Location: 129551-130292 bp Feature: domain Description: AbiEii Location: 12 9551-1302 92 bp Feature: gene Location: 130416-131219 bp Feature: domain Description: AbiEi_3_N Location: 130449-130710 bp Feature: domain Description: AbiEi_3_N Location: 130449-130710 bp Feature: domain Description: AbiEi_3 Location: 130722-131178 bp Feature: domain Description: AbiEi_3 Location: 13072 2 -131178 bp Feature: gene Location: 131514-134723 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 132042-132531 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 132 042 -132 531 bp Feature: domain Description: nitrilase Location: 134037-134634 bp Feature: domain Description: nitrilase Location: 134037-134634 bp Feature: gene Location: 134884-135024 bp Feature: domain Description: Phage_ASH Location: 134911-135004 bp Feature: domain Description: Phage_ASH Location: 134911-135004 bp Feature: gene Location: 135070-135540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: SQBI01000213.1 (21569 bp)
Overview 1 RT 1: 13500-16879 bp Neighborhood of RT #1 [13500, 16884] PRK09413 RVT-GII RVT-GII GIIM PinE Feature: gene Location: 13500-13697 bp Feature: domain Description: PRK09413 Location: 13503-13665 bp Feature: domain Description: PRK09413 Location: 13 503 -13 665 bp Feature: gene Location: 13752-14102 bp Feature: gene Location: 14173-14586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14494-14581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14494-14581 bp Feature: gene Location: 14650-15525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14656-15112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14656-15112 bp Feature: domain Description: GIIM Note: maturase Location: 15160-15391 bp Feature: domain Description: GIIM Note: maturase Location: 15160-153 91 bp Feature: gene Location: 15736-16137 bp Feature: gene Location: 16237-16884 bp Feature: domain Description: PinE Location: 16330-16879 bp Feature: domain Description: PinE Location: 163 3 0-16879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)