myRT

myRT report for GCA_006238785.1_ASM623878v1

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Seq: SQCE01000166.1 (156276 bp)
Overview 1 RT 1: 22268-28511 bp Neighborhood of RT #1 [22268, 28648] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22268-22534 bp Feature: domain Description: Phage_integrase Location: 22334-22430 bp Feature: domain Description: Phage_integrase Location: 22334-22430 bp Feature: gene Location: 22617-23087 bp Feature: gene Location: 23434-26643 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23962-24451 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23962-24451 bp Feature: domain Description: nitrilase Location: 25957-26554 bp Feature: domain Description: nitrilase Location: 25957-26554 bp Feature: gene Location: 26938-27741 bp Feature: domain Description: AbiEi_3_N Location: 26971-27232 bp Feature: domain Description: AbiEi_3_N Location: 26971 -27232 bp Feature: domain Description: AbiEi_3 Location: 27244-27700 bp Feature: domain Description: AbiEi_3 Location: 27244-27700 bp Feature: gene Location: 27728-28648 bp Feature: domain Description: AbiEii Location: 27770-28511 bp Feature: domain Description: AbiEii Location: 27770-2851 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: SQCE01000074.1 (1363 bp)
Overview 1 RT 1: 139-1117 bp Neighborhood of RT #1 [139, 1362] RVT-GII GIIM Feature: gene Location: 139-1362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 -844 bp Feature: domain Description: GIIM Note: maturase Location: 919-1117 bp Feature: domain Description: GIIM Note: maturase Location: 919-1117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SQCE01000075.1 (1062 bp)
Overview 1 RT 1: 2-1061 bp Neighborhood of RT #1 [2, 1060] PHA02517 RVT-GII Feature: gene Location: 2-142 bp Feature: domain Description: PHA02517 Location: 8-77 bp Feature: domain Description: PHA02517 Location: 8-77 bp Feature: gene Location: 734-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII