myRT

myRT report for GCA_006241065.1_ASM624106v1

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Seq: SPZQ01000156.1 (29782 bp)
Overview 1 RT 1: 12478-18844 bp Neighborhood of RT #1 [12478, 18894] Lon_rel_chp zinc_ribbon_11 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 12478-14562 bp Feature: domain Description: Lon_rel_chp Location: 12544-14560 bp Feature: domain Description: Lon_rel_chp Location: 1 2544-1 4560 bp Feature: gene Location: 14827-15138 bp Feature: domain Description: zinc_ribbon_11 Location: 14842-15073 bp Feature: domain Description: zinc_ribbon_1 1 Location: 1 4842-1 5073 bp Feature: gene Location: 15572-17095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15845-16577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5845-1 6577 bp Feature: domain Description: GIIM Note: maturase Location: 16652-16850 bp Feature: domain Description: GIIM Note: maturase Location: 1 6652-1 6850 bp Feature: gene Location: 17389-17760 bp Feature: gene Location: 18253-18894 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18367-18844 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 8367-1 8844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lon_rel_chp (TIGR02653), zinc_ribbon_11 (pfam11682), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: SPZQ01000075.1 (143976 bp)
Overview 1 RT 1: 86419-90360 bp Neighborhood of RT #1 [86419, 90360] RVT-Retrons Feature: gene Location: 86419-87558 bp Feature: gene Location: 87604-87771 bp Feature: gene Location: 87793-89565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87952-88570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87952 -88570 bp Feature: gene Location: 89786-89929 bp Feature: gene Location: 90121-90360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SPZQ01000074.1 (172736 bp)
Overview 1 RT 1: 165030-167995 bp Neighborhood of RT #1 [165030, 168192] SLATT_5 RVT-UG17 DUF4094 Peptidase_S74 Feature: gene Location: 165030-165170 bp Feature: gene Location: 165183-165734 bp Feature: domain Description: SLATT_5 Location: 165189-165705 bp Feature: domain Description: SLATT_5 Location: 165189-165705 bp Feature: gene Location: 165712-167082 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 165940-166546 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 165940-166546 bp Feature: gene Location: 167190-167477 bp Feature: gene Location: 167488-168192 bp Feature: domain Description: DUF4094 Location: 167530-167620 bp Feature: domain Description: DUF4094 Location: 16753 0-167620 bp Feature: domain Description: Peptidase_S74 Location: 167836-167995 bp Feature: domain Description: Peptidase_S74 Location: 16783 6-167995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, DUF4094 (pfam13334), Peptidase_S74 (pfam13884)