myRT

myRT report for GCA_006241105.1_ASM624110v1

Download annotations/find similar RTs

Seq: SPZN01000085.1 (40421 bp)
Overview 1 RT 1: 18528-22167 bp Neighborhood of RT #1 [18528, 22334] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 18528-18830 bp Feature: domain Description: InsE Location: 18567-18816 bp Feature: domain Description: InsE Location: 1 8567-1 881 6 bp Feature: gene Location: 18886-19311 bp Feature: domain Description: PHA02517 Location: 18910-19246 bp Feature: domain Description: PHA0251 7 Location: 1 891 0-1 9246 bp Feature: gene Location: 19903-21426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20176-20908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 76-20908 bp Feature: domain Description: GIIM Note: maturase Location: 20983-21181 bp Feature: domain Description: GIIM Note: maturase Location: 20983-21 1 81 bp Feature: gene Location: 21621-21755 bp Feature: gene Location: 21921-22334 bp Feature: domain Description: COG2085 Location: 22020-22167 bp Feature: domain Description: COG2085 Location: 22020-221 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: SPZN01000114.1 (402318 bp)
Overview 1 RT 1: 257072-264773 bp Neighborhood of RT #1 [257072, 264910] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 257072-258325 bp Feature: domain Description: proA Location: 257099-258290 bp Feature: domain Description: proA Location: 2 57099-2 582 90 bp Feature: gene Location: 258879-259349 bp Feature: gene Location: 259696-262905 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 260224-260713 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 602 2 4-2 60713 bp Feature: domain Description: nitrilase Location: 262219-262816 bp Feature: domain Description: nitrilase Location: 2 62 2 19-2 62 816 bp Feature: gene Location: 263200-264003 bp Feature: domain Description: AbiEi_3_N Location: 263233-263494 bp Feature: domain Description: AbiEi_3_N Location: 2 632 33-2 63494 bp Feature: domain Description: AbiEi_3 Location: 263506-263962 bp Feature: domain Description: AbiEi_3 Location: 2 63506-2 63962 bp Feature: gene Location: 263990-264910 bp Feature: domain Description: AbiEii Location: 264032-264773 bp Feature: domain Description: AbiEii Location: 2 64032 -2 64773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: SPZN01000173.1 (22924 bp)
Overview 1 RT 1: 16020-21383 bp Neighborhood of RT #1 [16020, 21388] lnt RVT-GII RVT-GII GIIM PinE Feature: gene Location: 16020-17231 bp Feature: domain Description: lnt Location: 16323-17049 bp Feature: domain Description: lnt Location: 163 23 -17049 bp Feature: gene Location: 18276-18626 bp Feature: gene Location: 18697-19110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19018-19105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19018-19105 bp Feature: gene Location: 19174-20049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19180-19636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19180-1963 6 bp Feature: domain Description: GIIM Note: maturase Location: 19684-19915 bp Feature: domain Description: GIIM Note: maturase Location: 19684-19915 bp Feature: gene Location: 20258-20659 bp Feature: gene Location: 20759-21388 bp Feature: domain Description: PinE Location: 20834-21383 bp Feature: domain Description: PinE Location: 2083 4-213 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lnt (TIGR00546), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: SPZN01000109.1 (82949 bp)
Overview 1 RT 1: 52154-55818 bp Neighborhood of RT #1 [52154, 55832] PRK10276 RVT-GII PRK12363 Feature: gene Location: 52154-52588 bp Feature: domain Description: PRK10276 Location: 52202-52562 bp Feature: domain Description: PRK10276 Location: 52202-52562 bp Feature: gene Location: 52591-52965 bp Feature: gene Location: 52990-54477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53395-54085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53395-54 085 bp Feature: gene Location: 54920-55369 bp Feature: gene Location: 55392-55832 bp Feature: domain Description: PRK12363 Location: 55419-55818 bp Feature: domain Description: PRK12363 Location: 554 19-55818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PRK12363 (phosphoglycerol transferase I; Provisional)