myRT

myRT report for GCA_006334985.1_ASM633498v1

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Seq: VDLX01000047.1 (10375 bp)
Overview 1 RT 1: 6157-10250 bp Neighborhood of RT #1 [6157, 10252] PadR RVT-GII GIIM Glyoxalase_6 Transposase_mut Feature: gene Location: 6157-6750 bp Feature: domain Description: PadR Location: 6172-6475 bp Feature: domain Description: PadR Location: 61 72-6475 bp Feature: gene Location: 6917-7171 bp Feature: gene Location: 7925-9181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-8804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 41 -8804 bp Feature: domain Description: GIIM Note: maturase Location: 8888-9110 bp Feature: domain Description: GIIM Note: maturase Location: 8888-91 1 0 bp Feature: gene Location: 9362-9796 bp Feature: domain Description: Glyoxalase_6 Location: 9386-9791 bp Feature: domain Description: Glyoxalase_6 Location: 9386-9791 bp Feature: gene Location: 9995-10252 bp Feature: domain Description: Transposase_mut Location: 10025-10250 bp Feature: domain Description: Transposase_mut Location: 1 0025-1 0250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-GII, GIIM (pfam08388), Glyoxalase_6 (pfam18029), Transposase_mut (pfam00872)

Seq: VDLX01000002.1 (744852 bp)
Overview 1 RT 1: 143054-147909 bp Neighborhood of RT #1 [143054, 148193] RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 143054-143194 bp Feature: gene Location: 143357-143560 bp Feature: gene Location: 143675-145096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143996-144671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143996-144671 bp Feature: domain Description: GIIM Note: maturase Location: 144746-144974 bp Feature: domain Description: GIIM Note: maturase Location: 144746-144974 bp Feature: gene Location: 145804-146439 bp Feature: domain Description: AcrR Location: 145843-146284 bp Feature: domain Description: AcrR Location: 145843-1462 84 bp Feature: gene Location: 146577-148193 bp Feature: domain Description: MFS_MMR_MDR_like Location: 146619-147909 bp Feature: domain Description: MFS_MMR_MDR_like Location: 146619-147909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: VDLX01000011.1 (380472 bp)
Overview 1 RT 1: 5196-9483 bp Neighborhood of RT #1 [5196, 9483] Acetyltransf_1 RVT-GII GIIM Feature: gene Location: 5196-5663 bp Feature: domain Description: Acetyltransf_1 Location: 5325-5628 bp Feature: domain Description: Acetyltransf_1 Location: 53 25-5628 bp Feature: gene Location: 6261-6458 bp Feature: gene Location: 6583-6927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6589-6691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6589-6691 bp Feature: domain Description: GIIM Note: maturase Location: 6763-6865 bp Feature: domain Description: GIIM Note: maturase Location: 6763 -6865 bp Feature: gene Location: 7429-8049 bp Feature: gene Location: 8062-9483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, GIIM (pfam08388)

Seq: VDLX01000041.1 (44390 bp)
Overview 1 RT 1: 33950-38633 bp Neighborhood of RT #1 [33950, 38638] DUF4096 RVT-GII GIIM DUF4096 DDE_Tnp_1 DDE_Tnp_1 RVT-GII COG5659 DDE_5 Feature: gene Location: 33950-34270 bp Feature: domain Description: DUF4096 Location: 33983-34217 bp Feature: domain Description: DUF4 096 Location: 33983-34 217 bp Feature: gene Location: 34281-34502 bp Feature: gene Location: 34631-35131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34637-34706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 637-34 706 bp Feature: domain Description: GIIM Note: maturase Location: 34778-35003 bp Feature: domain Description: GIIM Note: maturase Location: 34 778-35003 bp Feature: gene Location: 35204-35659 bp Feature: domain Description: DUF4096 Location: 35240-35471 bp Feature: domain Description: DUF4 096 Location: 3524 0-354 71 bp Feature: gene Location: 35692-36018 bp Feature: domain Description: DDE_Tnp_1 Location: 35704-35839 bp Feature: domain Description: DDE_Tnp_1 Location: 35704 -35839 bp Feature: domain Description: DDE_Tnp_1 Location: 35878-35992 bp Feature: domain Description: DDE_Tnp_1 Location: 35878-35992 bp Feature: gene Location: 36190-36390 bp Feature: gene Location: 36449-36958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36773-36911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36773-36911 bp Feature: gene Location: 37488-38060 bp Feature: domain Description: COG5659 Location: 37491-37986 bp Feature: domain Description: COG5659 Location: 374 91-37986 bp Feature: gene Location: 38201-38638 bp Feature: domain Description: DDE_5 Location: 38303-38633 bp Feature: domain Description: DDE_5 Location: 38303-38633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), COG5659 (SRSO17 transposase ), DDE_5 (pfam13546)