myRT

myRT report for GCA_006345815.1_ASM634581v1

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Seq: VCIG01000022.1 (1931 bp)
Overview 1 RT 1: 110-1682 bp Neighborhood of RT #1 [110, 1864] RVT-GII GIIM Feature: gene Location: 110-298 bp Feature: gene Location: 431-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1 41 8 bp Feature: domain Description: GIIM Note: maturase Location: 1466-1682 bp Feature: domain Description: GIIM Note: maturase Location: 1 466-1 682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VCIG01000038.1 (1011582 bp)
Overview 1 RT 1: 493319-498250 bp Neighborhood of RT #1 [493319, 498282] FRG RVT-Retrons Trypsin_2 PinE Feature: gene Location: 493319-493774 bp Feature: gene Location: 494315-495073 bp Feature: domain Description: FRG Location: 494393-494690 bp Feature: domain Description: FRG Location: 494393-494690 bp Feature: gene Location: 495594-496964 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 495600-496140 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 495600-496140 bp Feature: domain Description: Trypsin_2 Location: 496485-496887 bp Feature: domain Description: Trypsin_2 Location: 496485-496887 bp Feature: gene Location: 497216-497386 bp Feature: gene Location: 497671-498282 bp Feature: domain Description: PinE Location: 497689-498250 bp Feature: domain Description: PinE Location: 497689-4982 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRG (smart00901), RVT-Retrons, Trypsin_2 (pfam13365), PinE (COG1961)

Seq: VCIG01000020.1 (8936 bp)
Overview 1 RT 1: 3992-8819 bp Neighborhood of RT #1 [3992, 8833] RVT-G2L4 GIIM YigB YigB PinE Feature: gene Location: 3992-4423 bp Feature: gene Location: 4460-5086 bp Feature: gene Location: 5456-6730 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 5678-6272 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 5678-6272 bp Feature: domain Description: GIIM Note: maturase Location: 6470-6629 bp Feature: domain Description: GIIM Note: maturase Location: 6470-6629 bp Feature: gene Location: 6847-8277 bp Feature: domain Description: YigB Location: 6859-7285 bp Feature: domain Description: YigB Location: 6859-7285 bp Feature: domain Description: YigB Location: 7402-7528 bp Feature: domain Description: YigB Location: 7402-7528 bp Feature: gene Location: 8543-8833 bp Feature: domain Description: PinE Location: 8591-8819 bp Feature: domain Description: PinE Location: 8591-8819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, GIIM (pfam08388), YigB (COG1011), PinE (COG1961)