myRT

myRT report for GCA_006349315.1_ASM634931v1

Download annotations/find similar RTs

Seq: QRGL01000054.1 (9687 bp)
Overview 1 RT 1: 2141-7866 bp Neighborhood of RT #1 [2141, 8084] FimC FimD RVT-UG4 Integrase_1 Feature: gene Location: 2141-2869 bp Feature: domain Description: FimC Location: 2189-2852 bp Feature: domain Description: FimC Location: 21 89-2852 bp Feature: gene Location: 2901-5510 bp Feature: domain Description: FimD Location: 2958-5499 bp Feature: domain Description: FimD Location: 2958-5499 bp Feature: gene Location: 5510-6751 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5918-6362 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 591 8-6362 bp Feature: gene Location: 6748-7587 bp Feature: gene Location: 7644-8084 bp Feature: domain Description: Integrase_1 Location: 7650-7866 bp Feature: domain Description: Integrase_1 Location: 7650-7866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835)

Seq: QRGL01000056.1 (8325 bp)
Overview 1 RT 1: 3-3590 bp Neighborhood of RT #1 [3, 3590] Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 3-563 bp Feature: domain Description: Arr-ms Location: 171-477 bp Feature: domain Description: Arr-ms Location: 171-477 bp Feature: gene Location: 644-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1460 bp Feature: domain Description: GIIM Note: maturase Location: 1499-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1499-1718 bp Feature: gene Location: 2618-3172 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2621-3170 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2 62 1-3170 bp Feature: gene Location: 3165-3590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)