myRT

myRT report for GCA_006369665.1_ASM636966v1

Download annotations/find similar RTs

Seq: NNFC01000083.1 (12586 bp)
Overview 1 RT 1: 1-3499 bp Neighborhood of RT #1 [1, 3546] RVT-Retrons AAA_25 INT_Rci_Hp1_C Feature: gene Location: 1-912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 184-784 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 84-784 bp Feature: gene Location: 1300-2367 bp Feature: domain Description: AAA_25 Location: 1396-1885 bp Feature: domain Description: AAA_25 Location: 1 396-1 885 bp Feature: gene Location: 2449-3546 bp Feature: domain Description: INT_Rci_Hp1_C Location: 3034-3499 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 3034-3499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_25 (pfam13481), INT_Rci_Hp1_C (cd00796)

Seq: NNFC01000091.1 (6931 bp)
Overview 1 RT 1: 1601-6924 bp Neighborhood of RT #1 [1601, 6929] DUF262 DUF262 DUF1524 RVT-UG2 Feature: gene Location: 1601-3070 bp Feature: domain Description: DUF262 Location: 1688-2249 bp Feature: domain Description: DUF2 62 Location: 1688-2 2 49 bp Feature: gene Location: 3063-5120 bp Feature: domain Description: DUF262 Location: 3117-3741 bp Feature: domain Description: DUF2 62 Location: 3117-3741 bp Feature: domain Description: DUF1524 Location: 4722-5085 bp Feature: domain Description: DUF152 4 Location: 472 2 -5085 bp Feature: gene Location: 6009-6929 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6207-6924 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 62 07-692 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), DUF1524 (pfam07510), RVT-UG2

Seq: NNFC01000176.1 (300 bp)
Overview 1 RT 1: 134-272 bp Neighborhood of RT #1 [134, 298] RVT-Retrons Feature: gene Location: 134-298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 137-272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 7-272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NNFC01000076.1 (17106 bp)
Overview 1 RT 1: 6094-9865 bp 2 RT 2: 14116-17101 bp Neighborhood of RT #1 [6094, 9865] DUF4832 ArgO RVT_N RVT-GII GIIM Neighborhood of RT #2 [14116, 17103] Phage_AlpA RVT-Retrons Feature: gene Location: 6094-6588 bp Feature: domain Description: DUF4832 Location: 6178-6535 bp Feature: domain Description: DUF4 832 Location: 6178-6535 bp Feature: gene Location: 6673-6957 bp Feature: domain Description: ArgO Location: 6676-6931 bp Feature: domain Description: ArgO Location: 6676-6931 bp Feature: gene Location: 7501-9132 bp Feature: domain Description: RVT_N Location: 7708-7951 bp Feature: domain Description: RVT_N Location: 7708-7951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7996-8623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7996-8623 bp Feature: domain Description: GIIM Note: maturase Location: 8683-8908 bp Feature: domain Description: GIIM Note: maturase Location: 8683-8908 bp Feature: gene Location: 9330-9584 bp Feature: gene Location: 9587-9865 bp Feature: gene Location: 14116-14433 bp Feature: domain Description: Phage_AlpA Location: 14236-14380 bp Feature: domain Description: Phage_AlpA Location: 14 236-14 380 bp Feature: gene Location: 14548-15900 bp Feature: gene Location: 16570-17103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16675-17101 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16675-17101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4832 (pfam16116), ArgO (COG1279), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Phage_AlpA (pfam05930), RVT-Retrons

Seq: NNFC01000162.1 (221 bp)
Overview 1 RT 1: 3-213 bp Neighborhood of RT #1 [3, 218] RVT-UG17 Feature: gene Location: 3-218 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6-213 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6-213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: NNFC01000161.1 (203 bp)
Overview 1 RT 1: 3-201 bp Neighborhood of RT #1 [3, 200] RVT-UG17 Feature: gene Location: 3-200 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 78-201 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 78-201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: NNFC01000033.1 (123967 bp)
Overview 1 RT 1: 7959-14421 bp Neighborhood of RT #1 [7959, 14421] SMODS AGS_C SLATT_6 RVT-AbiP2 Abi_C Feature: gene Location: 7959-9224 bp Feature: domain Description: SMODS Location: 7962-8436 bp Feature: domain Description: SMODS Location: 7 962-8436 bp Feature: domain Description: AGS_C Location: 8847-9222 bp Feature: domain Description: AGS_C Location: 8847 -9222 bp Feature: gene Location: 9237-9947 bp Feature: domain Description: SLATT_6 Location: 9240-9765 bp Feature: domain Description: SLATT_6 Location: 9240-97 65 bp Feature: gene Location: 10380-11918 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 10809-11268 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 10809-11268 bp Feature: gene Location: 12187-13167 bp Feature: domain Description: Abi_C Location: 12877-13090 bp Feature: domain Description: Abi_C Location: 1287 7 -13090 bp Feature: gene Location: 13240-14421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMODS (pfam18144), AGS_C (pfam18134), SLATT_6 (pfam18169), RVT-AbiP2, Abi_C (pfam14355)