myRT

myRT report for GCA_006371795.1_ASM637179v1

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Seq: NNGW01000010.1 (507085 bp)
Overview 1 RT 1: 1903-9839 bp Neighborhood of RT #1 [1903, 9913] COG3547 RVT_N RVT-GII GIIM GIIM RVT_N RVT-GII PRK08310 YjbI Feature: gene Location: 1903-2088 bp Feature: gene Location: 2121-2507 bp Feature: domain Description: COG3547 Location: 2148-2448 bp Feature: domain Description: COG3547 Location: 21 48-2448 bp Feature: gene Location: 2885-4363 bp Feature: domain Description: RVT_N Location: 2939-3182 bp Feature: domain Description: RVT_N Location: 2939-31 82 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3227-3854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3227-3854 bp Feature: domain Description: GIIM Note: maturase Location: 3920-4139 bp Feature: domain Description: GIIM Note: maturase Location: 3920-41 39 bp Feature: gene Location: 4412-4573 bp Feature: gene Location: 4740-4916 bp Feature: gene Location: 4973-5224 bp Feature: gene Location: 5883-6338 bp Feature: domain Description: GIIM Note: maturase Location: 5889-6099 bp Feature: domain Description: GIIM Note: maturase Location: 5889-6099 bp Feature: gene Location: 6299-7375 bp Feature: domain Description: RVT_N Location: 6347-6587 bp Feature: domain Description: RVT_N Location: 6347-6587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6635-7262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6635-7262 bp Feature: gene Location: 7969-9174 bp Feature: domain Description: PRK08310 Location: 8020-9160 bp Feature: domain Description: PRK0831 0 Location: 8020-91 60 bp Feature: gene Location: 9248-9913 bp Feature: domain Description: YjbI Location: 9278-9839 bp Feature: domain Description: YjbI Location: 9278-9839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK08310 (amidase; Provisional), YjbI (COG2346)

Seq: NNGW01000042.1 (69508 bp)
Overview 1 RT 1: 3-3498 bp Neighborhood of RT #1 [3, 3521] RVT-UG5 Spt4 SH3_3 DUF4268 Feature: gene Location: 3-1319 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 522-1044 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 52 2 -1044 bp Feature: gene Location: 1535-2254 bp Feature: domain Description: Spt4 Location: 1538-1652 bp Feature: domain Description: Spt4 Location: 1538-1652 bp Feature: domain Description: SH3_3 Location: 1793-1973 bp Feature: domain Description: SH3_3 Location: 1793-1973 bp Feature: gene Location: 2367-3521 bp Feature: domain Description: DUF4268 Location: 3102-3498 bp Feature: domain Description: DUF42 68 Location: 3102 -3498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, Spt4 (pfam06093), SH3_3 (pfam08239), DUF4268 (pfam14088)