myRT

myRT report for GCA_006373315.1_ASM637331v1

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Seq: NNKJ01000019.1 (146114 bp)
Overview 1 RT 1: 2-3958 bp Neighborhood of RT #1 [2, 3981] RVT-UG5 SH3_3 DUF4268 Feature: gene Location: 2-1780 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 521-1043 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 521 -1 043 bp Feature: gene Location: 1996-2649 bp Feature: domain Description: SH3_3 Location: 2188-2368 bp Feature: domain Description: SH3_3 Location: 21 88-2368 bp Feature: gene Location: 2827-3981 bp Feature: domain Description: DUF4268 Location: 3562-3958 bp Feature: domain Description: DUF4268 Location: 3562-3958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, SH3_3 (pfam08239), DUF4268 (pfam14088)

Seq: NNKJ01000009.1 (64380 bp)
Overview 1 RT 1: 1803-6692 bp Neighborhood of RT #1 [1803, 6721] RVT_N RVT-GII GIIM PleD PRK11359 COG5001 Feature: gene Location: 1803-2054 bp Feature: gene Location: 2382-2513 bp Feature: gene Location: 2561-4192 bp Feature: domain Description: RVT_N Location: 2768-3011 bp Feature: domain Description: RVT_N Location: 2 768-3011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3056-3683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3056-3683 bp Feature: domain Description: GIIM Note: maturase Location: 3743-3968 bp Feature: domain Description: GIIM Note: maturase Location: 3743-3968 bp Feature: gene Location: 4211-4423 bp Feature: gene Location: 4598-6721 bp Feature: domain Description: PleD Location: 4652-5057 bp Feature: domain Description: PleD Location: 4652 -5057 bp Feature: domain Description: PRK11359 Location: 5057-5417 bp Feature: domain Description: PRK11359 Location: 5057-5417 bp Feature: domain Description: COG5001 Location: 5441-6692 bp Feature: domain Description: COG5001 Location: 5441-6692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PleD (COG3706), PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional), COG5001 (Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain )