myRT

myRT report for GCA_006461365.1_ASM646136v1

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Seq: VFRH01000035.1 (16185 bp)
Overview 1 RT 1: 8921-13213 bp Neighborhood of RT #1 [8921, 13213] autotrans_barl autotrans_barl RVT-UG4 Feature: gene Location: 8921-9427 bp Feature: domain Description: autotrans_barl Location: 8942-9425 bp Feature: domain Description: autotrans_barl Location: 8942-9425 bp Feature: gene Location: 9417-11552 bp Feature: domain Description: autotrans_barl Location: 10686-11475 bp Feature: domain Description: autotrans_barl Location: 1 0686-1 1 475 bp Feature: gene Location: 11646-12395 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11781-12222 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 781 -1 2222 bp Feature: gene Location: 12700-12921 bp Feature: gene Location: 12881-13213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), RVT-UG4

Seq: VFRH01000007.1 (271407 bp)
Overview 1 RT 1: 113897-118884 bp Neighborhood of RT #1 [113897, 119372] PRK15340 PRK15341 RVT-Retrons HNH_2 Feature: gene Location: 113897-114646 bp Feature: domain Description: PRK15340 Location: 113999-114644 bp Feature: domain Description: PRK15340 Location: 113999-114644 bp Feature: gene Location: 115004-115447 bp Feature: domain Description: PRK15341 Location: 115007-115445 bp Feature: domain Description: PRK15341 Location: 115007-115445 bp Feature: gene Location: 116476-117657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116626-117202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11662 6-1172 02 bp Feature: gene Location: 117647-118309 bp Feature: gene Location: 118614-119372 bp Feature: domain Description: HNH_2 Location: 118740-118884 bp Feature: domain Description: HNH_2 Location: 118740-118884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15340 (AraC family transcriptional regulator InvF), PRK15341 (type III secretion system invasion lipoprotein InvH), RVT-Retrons, HNH_2 (pfam13391)

Seq: VFRH01000026.1 (53044 bp)
Overview 1 RT 1: 28658-32337 bp Neighborhood of RT #1 [28658, 32337] BamE RVT-AbiP2 PRK10328 Feature: gene Location: 28658-29035 bp Feature: domain Description: BamE Location: 28670-28988 bp Feature: domain Description: BamE Location: 28670-28988 bp Feature: gene Location: 29437-29721 bp Feature: gene Location: 29976-31517 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30405-30864 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 0405-3 0864 bp Feature: gene Location: 31714-31965 bp Feature: domain Description: PRK10328 Location: 31753-31942 bp Feature: domain Description: PRK103 28 Location: 3 1753 -3 1942 bp Feature: gene Location: 32035-32337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BamE (COG2913), RVT-AbiP2, PRK10328 (DNA-binding protein StpA)