myRT

myRT report for GCA_006517175.1_ASM651717v1

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Seq: CP041186.1 (8047306 bp)
Overview 1 RT 1: 741676-746304 bp 2 RT 2: 1922471-1927289 bp 3 RT 3: 2859160-2869296 bp 4 RT 4: 5604486-5616650 bp 5 RT 5: 5835211-5839395 bp 6 RT 6: 6745949-6750304 bp 7 RT 7: 6949998-6957393 bp Neighborhood of RT #1 [741676, 746366] GIIM RVT-GII UlaG Neighborhood of RT #2 [1922471, 1927393] YhaK GIIM RVT-GII UlaG Neighborhood of RT #3 [2859160, 2869296] COG4637 COG4637 AAA_21 AAA_21 group_II_RT_mat RVT-UG6 Neighborhood of RT #4 [5604486, 5616650] WGR_DNA_ligase RVT-Retrons Neighborhood of RT #5 [5835211, 5839427] acyl_WS_DGAT RVT-GII GIIM Phage_holin_4_2 Neighborhood of RT #6 [6745949, 6750304] NADP_ADH RVT-GII GIIM Neighborhood of RT #7 [6949998, 6957401] InsE HTH_23 Tra5 RVT-GII GIIM Big_9 TSP3 TSP3 tand_rpt_95 TSP3 OmpA Feature: gene Location: 741676-742203 bp Feature: gene Location: 742717-743013 bp Feature: domain Description: GIIM Note: maturase Location: 742729-742897 bp Feature: domain Description: GIIM Note: maturase Location: 742729-742897 bp Feature: gene Location: 743027-744046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743369-743990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743369-743990 bp Feature: gene Location: 744734-745357 bp Feature: gene Location: 745362-746366 bp Feature: domain Description: UlaG Location: 745608-746304 bp Feature: domain Description: UlaG Location: 745608-746304 bp Feature: gene Location: 1922471-1923499 bp Feature: domain Description: YhaK Location: 1922552-1923395 bp Feature: domain Description: YhaK Location: 1 922552-1 923395 bp Feature: gene Location: 1923620-1923916 bp Feature: domain Description: GIIM Note: maturase Location: 1923632-1923806 bp Feature: domain Description: GIIM Note: maturase Location: 1 923632-1 923806 bp Feature: gene Location: 1923930-1924949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1924272-1924893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 924272-1 924893 bp Feature: gene Location: 1925555-1926391 bp Feature: gene Location: 1926533-1927393 bp Feature: domain Description: UlaG Location: 1926590-1927289 bp Feature: domain Description: UlaG Location: 1 926590-1 927289 bp Feature: gene Location: 2859160-2861046 bp Feature: domain Description: COG4637 Location: 2859169-2859304 bp Feature: domain Description: COG4637 Location: 28591 69-2859304 bp Feature: domain Description: COG4637 Location: 2859739-2860279 bp Feature: domain Description: COG4637 Location: 2859739-2860279 bp Feature: gene Location: 2861083-2862798 bp Feature: domain Description: AAA_21 Location: 2861170-2861233 bp Feature: domain Description: AAA_21 Location: 2861 1 70-2861 233 bp Feature: domain Description: AAA_21 Location: 2861821-2862088 bp Feature: domain Description: AAA_21 Location: 2861 821 -2862088 bp Feature: gene Location: 2862895-2867913 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2863129-2863342 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 28631 29-2863342 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 2863954-2864191 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 2863954-28641 91 bp Feature: gene Location: 2868025-2868567 bp Feature: gene Location: 2868922-2869296 bp Feature: gene Location: 5604486-5607593 bp Feature: domain Description: WGR_DNA_ligase Location: 5604507-5604732 bp Feature: domain Description: WGR_DNA_ligase Location: 5604507-5604732 bp Feature: gene Location: 5607596-5609212 bp Feature: gene Location: 5609544-5611070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5610087-5610702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 561 0087-561 0702 bp Feature: gene Location: 5611157-5612134 bp Feature: gene Location: 5612274-5616650 bp Feature: gene Location: 5835211-5835399 bp Feature: gene Location: 5835599-5837005 bp Feature: domain Description: acyl_WS_DGAT Location: 5835641-5836982 bp Feature: domain Description: acyl_WS_DGAT Location: 5835641 -5836982 bp Feature: gene Location: 5837599-5838618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5837941-5838562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5837941 -5838562 bp Feature: gene Location: 5838632-5838928 bp Feature: domain Description: GIIM Note: maturase Location: 5838644-5838818 bp Feature: domain Description: GIIM Note: maturase Location: 5838644-583881 8 bp Feature: gene Location: 5839059-5839427 bp Feature: domain Description: Phage_holin_4_2 Location: 5839074-5839395 bp Feature: domain Description: Phage_holin_4_2 Location: 5839074-5839395 bp Feature: gene Location: 6745949-6747016 bp Feature: domain Description: NADP_ADH Location: 6745964-6747011 bp Feature: domain Description: NADP_ADH Location: 6745964-674701 1 bp Feature: gene Location: 6747063-6747323 bp Feature: gene Location: 6748067-6749086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6748409-6749030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6748409-6749030 bp Feature: gene Location: 6749100-6749396 bp Feature: domain Description: GIIM Note: maturase Location: 6749112-6749280 bp Feature: domain Description: GIIM Note: maturase Location: 67491 1 2-6749280 bp Feature: gene Location: 6749576-6750304 bp Feature: gene Location: 6949998-6950483 bp Feature: domain Description: InsE Location: 6950025-6950163 bp Feature: domain Description: InsE Location: 6950025-69501 63 bp Feature: gene Location: 6950480-6951475 bp Feature: domain Description: HTH_23 Location: 6950495-6950576 bp Feature: domain Description: HTH_23 Location: 6950495-6950576 bp Feature: domain Description: Tra5 Location: 6950729-6951335 bp Feature: domain Description: Tra5 Location: 6950729-6951 335 bp Feature: gene Location: 6951591-6952190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6951597-6952134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6951 597-69521 34 bp Feature: gene Location: 6952204-6952500 bp Feature: domain Description: GIIM Note: maturase Location: 6952216-6952390 bp Feature: domain Description: GIIM Note: maturase Location: 695221 6-6952390 bp Feature: gene Location: 6952851-6957401 bp Feature: domain Description: Big_9 Location: 6953769-6954012 bp Feature: domain Description: Big_9 Location: 6953769-695401 2 bp Feature: domain Description: TSP3 Location: 6954057-6954228 bp Feature: domain Description: TSP3 Location: 6954057-6954228 bp Feature: domain Description: TSP3 Location: 6954234-6954372 bp Feature: domain Description: TSP3 Location: 6954234-6954372 bp Feature: domain Description: tand_rpt_95 Location: 6954495-6954768 bp Feature: domain Description: tand_rpt_95 Location: 6954495-6954768 bp Feature: domain Description: TSP3 Location: 6955317-6955440 bp Feature: domain Description: TSP3 Location: 695531 7-6955440 bp Feature: domain Description: OmpA Location: 6957057-6957393 bp Feature: domain Description: OmpA Location: 6957057-6957393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, UlaG (COG2220), YhaK (COG1741), COG4637 (Predicted ATPase ), AAA_21 (pfam13304), group_II_RT_mat (TIGR04416), RVT-UG6, WGR_DNA_ligase (cd07998), RVT-Retrons
acyl_WS_DGAT (TIGR02946), Phage_holin_4_2 (pfam04020), NADP_ADH (cd08285), InsE (COG2963), HTH_23 (pfam13384), Tra5 (COG2801), Big_9 (pfam17963), TSP3 (sd00002), tand_rpt_95 (NF012211), OmpA (pfam00691)