myRT

myRT report for GCA_006519675.1_ASM651967v1

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Seq: VIDV01000299.1 (1385 bp)
Overview 1 RT 1: 48-1384 bp Neighborhood of RT #1 [48, 1384] RVT-GII GIIM Feature: gene Location: 48-1190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141-759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 -759 bp Feature: domain Description: GIIM Note: maturase Location: 810-1041 bp Feature: domain Description: GIIM Note: maturase Location: 81 0-1 041 bp Feature: gene Location: 1175-1384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VIDV01000014.1 (107197 bp)
Overview 1 RT 1: 61015-65917 bp Neighborhood of RT #1 [61015, 65928] RVT-GII Intron_maturas2 ArdC Feature: gene Location: 61015-61485 bp Feature: gene Location: 61673-62068 bp Feature: gene Location: 62133-63995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62400-63231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 400-632 31 bp Feature: domain Description: Intron_maturas2 Location: 63342-63624 bp Feature: domain Description: Intron_maturas2 Location: 63342 -6362 4 bp Feature: gene Location: 64248-64556 bp Feature: gene Location: 64966-65928 bp Feature: domain Description: ArdC Location: 64993-65917 bp Feature: domain Description: ArdC Location: 64993-65917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), ArdC (COG4227)

Seq: VIDV01000169.1 (11583 bp)
Overview 1 RT 1: 6587-11568 bp Neighborhood of RT #1 [6587, 11568] DEDD_Tnp_IS110 RVT-GII RVT-GII GIIM RVT-GII Feature: gene Location: 6587-6973 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 6602-6920 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 6602-6920 bp Feature: gene Location: 7309-7596 bp Feature: gene Location: 8155-9099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8566-9067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8566-9067 bp Feature: gene Location: 9618-10868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9822-10479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9822-10479 bp Feature: domain Description: GIIM Note: maturase Location: 10560-10782 bp Feature: domain Description: GIIM Note: maturase Location: 10560-10782 bp Feature: gene Location: 10876-11226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10945-11134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10945-1113 4 bp Feature: gene Location: 11230-11568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), RVT-GII, GIIM (pfam08388)

Seq: VIDV01000275.1 (1904 bp)
Overview 1 RT 1: 90-1902 bp Neighborhood of RT #1 [90, 1902] RVT-GII GIIM Feature: gene Location: 90-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1017 bp Feature: domain Description: GIIM Note: maturase Location: 1092-1305 bp Feature: domain Description: GIIM Note: maturase Location: 1092-1305 bp Feature: gene Location: 1431-1640 bp Feature: gene Location: 1669-1902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VIDV01000437.1 (235 bp)
Overview 1 RT 1: 3-228 bp Neighborhood of RT #1 [3, 233] RVT-GII Feature: gene Location: 3-233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VIDV01000182.1 (10635 bp)
Overview 1 RT 1: 2-2888 bp Neighborhood of RT #1 [2, 2923] DDE_Tnp_IS66 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 2-286 bp Feature: domain Description: DDE_Tnp_IS66 Location: 116-284 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 116 -284 bp Feature: gene Location: 437-1678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 638-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 38-1322 bp Feature: gene Location: 2099-2491 bp Feature: gene Location: 2450-2923 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2453-2756 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 2453-2756 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2777-2888 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 2777-2888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, DDE_Tnp_IS66_C (pfam13817)

Seq: VIDV01000300.1 (1374 bp)
Overview 1 RT 1: 2-1371 bp Neighborhood of RT #1 [2, 1371] RVT-GII Feature: gene Location: 2-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-869 bp Feature: gene Location: 1171-1371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VIDV01000140.1 (18486 bp)
Overview 1 RT 1: 3-941 bp Neighborhood of RT #1 [3, 941] RVT-GII group_II_RT_mat Feature: gene Location: 3-401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-246 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 249-324 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 249-324 bp Feature: gene Location: 405-566 bp Feature: gene Location: 582-941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: VIDV01000272.1 (2019 bp)
Overview 1 RT 1: 43-1477 bp Neighborhood of RT #1 [43, 1854] RVT-GII Feature: gene Location: 43-372 bp Feature: gene Location: 379-1854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII