myRT

myRT report for GCA_006538445.1_ASM653844v1

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Seq: BJKS01000002.1 (366298 bp)
Overview 1 RT 1: 358238-366161 bp Neighborhood of RT #1 [358238, 366202] Csm2_III-A cas_TM1811_Csm1 RVT-GII GIIM TPR COG4951 Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 358238-358687 bp Feature: domain Description: Csm2_III-A Location: 358361-358682 bp Feature: domain Description: Csm2_III-A Location: 358361 -358682 bp Feature: gene Location: 358680-360989 bp Feature: domain Description: cas_TM1811_Csm1 Location: 358704-360603 bp Feature: domain Description: cas_TM1 81 1 _Csm1 Location: 358704-360603 bp Feature: gene Location: 362102-364927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362321-362906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362321 -362906 bp Feature: domain Description: GIIM Note: maturase Location: 362957-363077 bp Feature: domain Description: GIIM Note: maturase Location: 362957-363077 bp Feature: domain Description: TPR Location: 363245-363524 bp Feature: domain Description: TPR Location: 363245-363524 bp Feature: domain Description: COG4951 Location: 363608-364355 bp Feature: domain Description: COG4951 Location: 363608-364355 bp Feature: gene Location: 364930-365925 bp Feature: domain Description: Cas1_I-II-III Location: 364939-365887 bp Feature: domain Description: Cas1 _I-II-III Location: 364939-365887 bp Feature: gene Location: 365927-366202 bp Feature: domain Description: Cas2_I_II_III Location: 365936-366161 bp Feature: domain Description: Cas2_I_II_III Location: 365936-3661 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csm2_III-A (pfam03750), cas_TM1811_Csm1 (TIGR02578), RVT-GII, GIIM (pfam08388), TPR (smart00028), COG4951 (Uncharacterized protein ), Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)