myRT

myRT report for GCA_006538465.1_ASM653846v1

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Seq: BJLB01000001.1 (5681712 bp)
Overview 1 RT 1: 29567-33372 bp 2 RT 2: 35629-39513 bp 3 RT 3: 134455-139071 bp 4 RT 4: 153195-155760 bp 5 RT 5: 246353-252072 bp 6 RT 6: 622119-630485 bp 7 RT 7: 774440-779732 bp 8 RT 8: 785456-787985 bp 9 RT 9: 873195-877540 bp 10 RT 10: 891543-899591 bp 11 RT 11: 1188435-1197204 bp 12 RT 12: 1321937-1325964 bp 13 RT 13: 1443508-1446350 bp 14 RT 14: 1510603-1515170 bp 15 RT 15: 1548152-1553337 bp 16 RT 16: 2264490-2274480 bp 17 RT 17: 2662321-2665782 bp 18 RT 18: 3193435-3197495 bp 19 RT 19: 3844174-3848460 bp 20 RT 20: 4042842-4045947 bp 21 RT 21: 4061317-4070271 bp 22 RT 22: 4144413-4150830 bp 23 RT 23: 4455192-4458951 bp 24 RT 24: 4803047-4806806 bp 25 RT 25: 5248808-5253753 bp 26 RT 26: 5497499-5503337 bp 27 RT 27: 5561220-5565792 bp 28 RT 28: 5576474-5583377 bp 29 RT 29: 5589659-5600109 bp 30 RT 30: 5605136-5610426 bp Neighborhood of RT #1 [29567, 33372] BglG PTS_EIIA_2 RVT-GII RVT-GII Neighborhood of RT #2 [35629, 39620] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII GIIM PHA02517 HTH_21 Neighborhood of RT #3 [134455, 139133] YrpB RVT-GII GIIM SoxR YitT_membrane Neighborhood of RT #4 [153195, 155819] RVT-GII YhcG YhcG_C Neighborhood of RT #5 [246353, 252095] E_set_CDase_PDE_N AmyAc_CMD RVT-GII GIIM PurR Neighborhood of RT #6 [622119, 630487] RVT-GII HNHc TraC-F-type RVT-GII HNHc DUF3851 Neighborhood of RT #7 [774440, 779732] YicI RVT-GII IS285 Neighborhood of RT #8 [785456, 787985] INT_RitA_C_like recomb_XerD RVT-CRISPR-like Neighborhood of RT #9 [873195, 877540] RVT-GII IS285 Neighborhood of RT #10 [891543, 899614] RVT-GII HNHc TraC-F-type NlpD Spr Neighborhood of RT #11 [1188435, 1197204] VirB4_CagE VirB4_CagE RVT-GII HNHc TraC-F-type RVT-GII HNHc Neighborhood of RT #12 [1321937, 1325990] SAPR RVT-GII GIIM SAPR YwqE Neighborhood of RT #13 [1443508, 1446350] group_II_RT_mat RVT-GII GIIM Neighborhood of RT #14 [1510603, 1515170] Spr RVT-GII HNHc Neighborhood of RT #15 [1548152, 1553498] Virulence_RhuM Virulence_RhuM RVT-Retrons COG3943 HTH_Tnp_1 Neighborhood of RT #16 [2264490, 2274557] RVT-GII HNHc TraC-F-type RVT-GII HNHc CHAP Neighborhood of RT #17 [2662321, 2665782] RVT-GII GIIM Neighborhood of RT #18 [3193435, 3197495] YcgL RVT-DGRs Avd_like Neighborhood of RT #19 [3844174, 3848462] IS285 RVT-GII GIIM PRK14717 PRK13265 Neighborhood of RT #20 [4042842, 4045947] RVT-GII Neighborhood of RT #21 [4061317, 4070300] RVT-GII HNHc TraC-F-type RVT-GII HNHc N6_N4_Mtase Neighborhood of RT #22 [4144413, 4150830] RVT-GII Intron_maturas2 HNHc Neighborhood of RT #23 [4455192, 4458951] 7tmA_UII-R RVT-DGRs Neighborhood of RT #24 [4803047, 4806806] 7tmA_UII-R RVT-DGRs Neighborhood of RT #25 [5248808, 5253753] RVT-GII HNHc RVT-GII Neighborhood of RT #26 [5497499, 5503486] PstC PBP2_phosphate_like_1 RVT-GII GIIM APH NTP_transferase Neighborhood of RT #27 [5561220, 5565792] RVT-GII Intron_maturas2 HNHc VirD4 Neighborhood of RT #28 [5576474, 5583403] RVT-GII HNHc TraC-F-type Spr Neighborhood of RT #29 [5589659, 5600267] LPD11 YtxK COG4646 RVT-GII Integrase_DNA Phage_int_SAM_4 INT_ICEBs1_C_like Rol_Rep_N Rep_trans Neighborhood of RT #30 [5605136, 5610458] IS285 RVT-GII Intron_maturas2 HNHc HepA MobC Feature: gene Location: 29567-31522 bp Feature: domain Description: BglG Location: 29570-30893 bp Feature: domain Description: BglG Location: 29570-30893 bp Feature: domain Description: PTS_EIIA_2 Location: 31127-31508 bp Feature: domain Description: PTS_EIIA_2 Location: 31 1 27-31 508 bp Feature: gene Location: 31553-31852 bp Feature: gene Location: 31960-32409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32308-32407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32308-32407 bp Feature: gene Location: 32510-32719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32516-32597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3251 6-32597 bp Feature: gene Location: 32915-33229 bp Feature: gene Location: 33232-33372 bp Feature: gene Location: 35629-36609 bp Feature: domain Description: INT_RitB_C_like Location: 35965-36541 bp Feature: domain Description: INT_RitB_C_like Location: 35965-36541 bp Feature: gene Location: 36602-37837 bp Feature: domain Description: Phage_int_SAM_1 Location: 36974-37190 bp Feature: domain Description: Phage_int_SAM_1 Location: 36974-371 90 bp Feature: domain Description: INT_RitA_C_like Location: 37271-37802 bp Feature: domain Description: INT_RitA_C_like Location: 37271 -37802 bp Feature: gene Location: 38008-38667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38011-38218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3801 1 -3821 8 bp Feature: domain Description: GIIM Note: maturase Location: 38272-38491 bp Feature: domain Description: GIIM Note: maturase Location: 38272-38491 bp Feature: gene Location: 38835-39170 bp Feature: domain Description: PHA02517 Location: 38850-39168 bp Feature: domain Description: PHA0251 7 Location: 38850-391 68 bp Feature: gene Location: 39228-39620 bp Feature: domain Description: HTH_21 Location: 39354-39513 bp Feature: domain Description: HTH_21 Location: 39354-3951 3 bp Feature: gene Location: 134455-135588 bp Feature: domain Description: YrpB Location: 134467-135574 bp Feature: domain Description: YrpB Location: 1 34467-1 35574 bp Feature: gene Location: 136007-136207 bp Feature: gene Location: 136253-137245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136256-136790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36256-1 36790 bp Feature: domain Description: GIIM Note: maturase Location: 136853-137081 bp Feature: domain Description: GIIM Note: maturase Location: 1 36853-1 37081 bp Feature: gene Location: 137547-138416 bp Feature: domain Description: SoxR Location: 137616-137910 bp Feature: domain Description: SoxR Location: 1 3761 6-1 3791 0 bp Feature: gene Location: 138444-139133 bp Feature: domain Description: YitT_membrane Location: 138519-139071 bp Feature: domain Description: YitT_membrane Location: 1 3851 9-1 39071 bp Feature: gene Location: 153195-153332 bp Feature: gene Location: 153568-153759 bp Feature: gene Location: 154085-154330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154091-154325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 54091 -1 54325 bp Feature: gene Location: 155035-155463 bp Feature: domain Description: YhcG Location: 155095-155431 bp Feature: domain Description: YhcG Location: 1 55095-1 55431 bp Feature: gene Location: 155436-155819 bp Feature: domain Description: YhcG_C Location: 155439-155760 bp Feature: domain Description: YhcG_C Location: 1 55439-1 55760 bp Feature: gene Location: 246353-248479 bp Feature: domain Description: E_set_CDase_PDE_N Location: 246410-246698 bp Feature: domain Description: E_set_CDase_PDE_N Location: 24641 0-246698 bp Feature: domain Description: AmyAc_CMD Location: 246734-248141 bp Feature: domain Description: AmyAc_CMD Location: 246734-2481 41 bp Feature: gene Location: 248978-249178 bp Feature: gene Location: 249224-250216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249227-249761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249227-249761 bp Feature: domain Description: GIIM Note: maturase Location: 249824-250052 bp Feature: domain Description: GIIM Note: maturase Location: 249824-250052 bp Feature: gene Location: 250408-250824 bp Feature: gene Location: 251043-252095 bp Feature: domain Description: PurR Location: 251058-252072 bp Feature: domain Description: PurR Location: 251 058-252072 bp Feature: gene Location: 622119-623093 bp Feature: gene Location: 623165-623464 bp Feature: gene Location: 623817-625787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624153-624891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6241 53-624891 bp Feature: domain Description: HNHc Note: nucleases Location: 625446-625584 bp Feature: domain Description: HNHc Note: nucleases Location: 625446-625584 bp Feature: gene Location: 625953-627098 bp Feature: domain Description: TraC-F-type Location: 625977-627087 bp Feature: domain Description: TraC-F-type Location: 625977-627087 bp Feature: gene Location: 627383-627631 bp Feature: gene Location: 627830-629710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628163-628880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6281 63-628880 bp Feature: domain Description: HNHc Note: nucleases Location: 629462-629600 bp Feature: domain Description: HNHc Note: nucleases Location: 629462-629600 bp Feature: gene Location: 629886-630107 bp Feature: gene Location: 630104-630487 bp Feature: domain Description: DUF3851 Location: 630113-630485 bp Feature: domain Description: DUF3851 Location: 6301 1 3-630485 bp Feature: gene Location: 774440-776950 bp Feature: domain Description: YicI Location: 774575-776750 bp Feature: domain Description: YicI Location: 774575-776750 bp Feature: gene Location: 777135-777434 bp Feature: gene Location: 777542-777907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777662-777836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777662-777836 bp Feature: gene Location: 777958-779202 bp Feature: domain Description: IS285 Location: 778027-779194 bp Feature: domain Description: IS285 Location: 778027-7791 94 bp Feature: gene Location: 779457-779732 bp Feature: gene Location: 785456-785995 bp Feature: domain Description: INT_RitA_C_like Location: 785471-785960 bp Feature: domain Description: INT_RitA_C_like Location: 785471 -785960 bp Feature: gene Location: 786014-786688 bp Feature: domain Description: recomb_XerD Location: 786386-786680 bp Feature: domain Description: recomb_XerD Location: 786386-786680 bp Feature: gene Location: 786859-787023 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 786862-786976 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 786862-786976 bp Feature: gene Location: 787499-787660 bp Feature: gene Location: 787728-787985 bp Feature: gene Location: 873195-873761 bp Feature: gene Location: 873920-874165 bp Feature: gene Location: 874255-875550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 874510-875200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87451 0-875200 bp Feature: gene Location: 875766-877010 bp Feature: domain Description: IS285 Location: 875835-877002 bp Feature: domain Description: IS285 Location: 875835-877002 bp Feature: gene Location: 877265-877540 bp Feature: gene Location: 891543-892574 bp Feature: gene Location: 892646-892945 bp Feature: gene Location: 893298-895268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893634-894372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893634-894372 bp Feature: domain Description: HNHc Note: nucleases Location: 894927-895065 bp Feature: domain Description: HNHc Note: nucleases Location: 894927-895065 bp Feature: gene Location: 895359-896843 bp Feature: domain Description: TraC-F-type Location: 895392-896643 bp Feature: domain Description: TraC-F-type Location: 895392-896643 bp Feature: gene Location: 896843-899614 bp Feature: domain Description: NlpD Location: 898778-899150 bp Feature: domain Description: NlpD Location: 898778-8991 50 bp Feature: domain Description: Spr Location: 899234-899591 bp Feature: domain Description: Spr Location: 899234-899591 bp Feature: gene Location: 1188435-1189385 bp Feature: domain Description: VirB4_CagE Location: 1188519-1188942 bp Feature: domain Description: VirB4_CagE Location: 1 1 8851 9-1 1 88942 bp Feature: domain Description: VirB4_CagE Location: 1189197-1189305 bp Feature: domain Description: VirB4_CagE Location: 1 1 891 97-1 1 89305 bp Feature: gene Location: 1189457-1189756 bp Feature: gene Location: 1190109-1192079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1190445-1191183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 90445-1 1 91 1 83 bp Feature: domain Description: HNHc Note: nucleases Location: 1191738-1191876 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 91 738-1 1 91 876 bp Feature: gene Location: 1192170-1193390 bp Feature: domain Description: TraC-F-type Location: 1192197-1193379 bp Feature: domain Description: TraC-F-type Location: 1 1 921 97-1 1 93379 bp Feature: gene Location: 1193675-1193923 bp Feature: gene Location: 1194122-1196002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1194455-1195172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 94455-1 1 951 72 bp Feature: domain Description: HNHc Note: nucleases Location: 1195754-1195892 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 95754-1 1 95892 bp Feature: gene Location: 1196184-1196405 bp Feature: gene Location: 1196512-1197204 bp Feature: gene Location: 1321937-1322392 bp Feature: domain Description: SAPR Location: 1321955-1322300 bp Feature: domain Description: SAPR Location: 1 321 955-1 322300 bp Feature: gene Location: 1322900-1323100 bp Feature: gene Location: 1323146-1324138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1323149-1323683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3231 49-1 323683 bp Feature: domain Description: GIIM Note: maturase Location: 1323746-1323974 bp Feature: domain Description: GIIM Note: maturase Location: 1 323746-1 323974 bp Feature: gene Location: 1324699-1325232 bp Feature: domain Description: SAPR Location: 1324786-1325212 bp Feature: domain Description: SAPR Location: 1 324786-1 32521 2 bp Feature: gene Location: 1325229-1325990 bp Feature: domain Description: YwqE Location: 1325244-1325964 bp Feature: domain Description: YwqE Location: 1 325244-1 325964 bp Feature: gene Location: 1443508-1443675 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1443514-1443667 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 44351 4-1 443667 bp Feature: gene Location: 1443720-1443986 bp Feature: gene Location: 1444303-1445295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1444306-1444840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 444306-1 444840 bp Feature: domain Description: GIIM Note: maturase Location: 1444903-1445131 bp Feature: domain Description: GIIM Note: maturase Location: 1 444903-1 4451 31 bp Feature: gene Location: 1445668-1446015 bp Feature: gene Location: 1446036-1446350 bp Feature: gene Location: 1510603-1512318 bp Feature: domain Description: Spr Location: 1511971-1512295 bp Feature: domain Description: Spr Location: 1 51 1 971 -1 51 2295 bp Feature: gene Location: 1512299-1512523 bp Feature: gene Location: 1512699-1514579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513032-1513749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 3032-1 51 3749 bp Feature: domain Description: HNHc Note: nucleases Location: 1514331-1514469 bp Feature: domain Description: HNHc Note: nucleases Location: 1 51 4331 -1 51 4469 bp Feature: gene Location: 1514778-1515026 bp Feature: gene Location: 1515036-1515170 bp Feature: gene Location: 1548152-1548547 bp Feature: domain Description: Virulence_RhuM Location: 1548227-1548518 bp Feature: domain Description: Virulence_RhuM Location: 1 548227-1 54851 8 bp Feature: gene Location: 1548447-1549055 bp Feature: domain Description: Virulence_RhuM Location: 1548507-1548987 bp Feature: domain Description: Virulence_RhuM Location: 1 548507-1 548987 bp Feature: gene Location: 1549480-1551462 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1550620-1551184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 550620-1 551 1 84 bp Feature: gene Location: 1551555-1552577 bp Feature: domain Description: COG3943 Location: 1551573-1552542 bp Feature: domain Description: COG3943 Location: 1 551 573-1 552542 bp Feature: gene Location: 1553127-1553498 bp Feature: domain Description: HTH_Tnp_1 Location: 1553214-1553337 bp Feature: domain Description: HTH_Tnp_1 Location: 1 55321 4-1 553337 bp Feature: gene Location: 2264490-2265464 bp Feature: gene Location: 2265536-2265835 bp Feature: gene Location: 2266188-2268158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2266524-2267262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2266524-2267262 bp Feature: domain Description: HNHc Note: nucleases Location: 2267817-2267955 bp Feature: domain Description: HNHc Note: nucleases Location: 226781 7-2267955 bp Feature: gene Location: 2268324-2269469 bp Feature: domain Description: TraC-F-type Location: 2268351-2269458 bp Feature: domain Description: TraC-F-type Location: 2268351 -2269458 bp Feature: gene Location: 2269754-2270002 bp Feature: gene Location: 2270201-2272081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270534-2271251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270534-2271 251 bp Feature: domain Description: HNHc Note: nucleases Location: 2271833-2271971 bp Feature: domain Description: HNHc Note: nucleases Location: 2271 833-2271 971 bp Feature: gene Location: 2272263-2272478 bp Feature: gene Location: 2272839-2274557 bp Feature: domain Description: CHAP Location: 2274228-2274480 bp Feature: domain Description: CHAP Location: 2274228-2274480 bp Feature: gene Location: 2662321-2662596 bp Feature: gene Location: 2662753-2662923 bp Feature: gene Location: 2663157-2664149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2663160-2663694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26631 60-2663694 bp Feature: domain Description: GIIM Note: maturase Location: 2663757-2663985 bp Feature: domain Description: GIIM Note: maturase Location: 2663757-2663985 bp Feature: gene Location: 2664522-2664887 bp Feature: gene Location: 2665066-2665782 bp Feature: gene Location: 3193435-3194463 bp Feature: domain Description: YcgL Location: 3193495-3194269 bp Feature: domain Description: YcgL Location: 31 93495-31 94269 bp Feature: gene Location: 3194457-3194714 bp Feature: gene Location: 3195005-3196042 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3195215-3195815 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 9521 5-31 9581 5 bp Feature: gene Location: 3196269-3196631 bp Feature: domain Description: Avd_like Location: 3196290-3196617 bp Feature: domain Description: Avd_like Location: 31 96290-31 9661 7 bp Feature: gene Location: 3196689-3197495 bp Feature: gene Location: 3844174-3845418 bp Feature: domain Description: IS285 Location: 3844243-3845410 bp Feature: domain Description: IS285 Location: 3844243-384541 0 bp Feature: gene Location: 3845673-3845948 bp Feature: gene Location: 3846254-3847246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3846257-3846791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3846257-3846791 bp Feature: domain Description: GIIM Note: maturase Location: 3846854-3847082 bp Feature: domain Description: GIIM Note: maturase Location: 3846854-3847082 bp Feature: gene Location: 3847941-3848264 bp Feature: domain Description: PRK14717 Location: 3847944-3848262 bp Feature: domain Description: PRK1 471 7 Location: 3847944-3848262 bp Feature: gene Location: 3848280-3848462 bp Feature: domain Description: PRK13265 Location: 3848334-3848460 bp Feature: domain Description: PRK1 3265 Location: 3848334-3848460 bp Feature: gene Location: 4042842-4043408 bp Feature: gene Location: 4043567-4043812 bp Feature: gene Location: 4043902-4045197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4044157-4044847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40441 57-4044847 bp Feature: gene Location: 4045490-4045804 bp Feature: gene Location: 4045807-4045947 bp Feature: gene Location: 4061317-4062321 bp Feature: gene Location: 4062393-4062692 bp Feature: gene Location: 4063045-4065015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4063381-4064119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4063381 -40641 1 9 bp Feature: domain Description: HNHc Note: nucleases Location: 4064674-4064812 bp Feature: domain Description: HNHc Note: nucleases Location: 4064674-406481 2 bp Feature: gene Location: 4065181-4066341 bp Feature: domain Description: TraC-F-type Location: 4065196-4066330 bp Feature: domain Description: TraC-F-type Location: 40651 96-4066330 bp Feature: gene Location: 4066626-4066874 bp Feature: gene Location: 4067073-4068953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4067406-4068123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4067406-40681 23 bp Feature: domain Description: HNHc Note: nucleases Location: 4068705-4068843 bp Feature: domain Description: HNHc Note: nucleases Location: 4068705-4068843 bp Feature: gene Location: 4069135-4069344 bp Feature: gene Location: 4069341-4070300 bp Feature: domain Description: N6_N4_Mtase Location: 4069419-4070271 bp Feature: domain Description: N6_N4_Mtase Location: 406941 9-4070271 bp Feature: gene Location: 4144413-4145219 bp Feature: gene Location: 4145219-4145875 bp Feature: gene Location: 4146133-4147974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4146409-4147246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 46409-41 47246 bp Feature: domain Description: Intron_maturas2 Location: 4147318-4147648 bp Feature: domain Description: Intron_maturas2 Location: 41 4731 8-41 47648 bp Feature: domain Description: HNHc Note: nucleases Location: 4147795-4147945 bp Feature: domain Description: HNHc Note: nucleases Location: 41 47795-41 47945 bp Feature: gene Location: 4148584-4150194 bp Feature: gene Location: 4150204-4150830 bp Feature: gene Location: 4455192-4455581 bp Feature: domain Description: 7tmA_UII-R Location: 4455204-4455429 bp Feature: domain Description: 7tmA_UII-R Location: 4455204-4455429 bp Feature: gene Location: 4455588-4456145 bp Feature: gene Location: 4456099-4457223 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4456309-4456972 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4456309-4456972 bp Feature: gene Location: 4457275-4457409 bp Feature: gene Location: 4457803-4458951 bp Feature: gene Location: 4803047-4803436 bp Feature: domain Description: 7tmA_UII-R Location: 4803059-4803284 bp Feature: domain Description: 7tmA_UII-R Location: 4803059-4803284 bp Feature: gene Location: 4803443-4804000 bp Feature: gene Location: 4803954-4805078 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4804164-4804827 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48041 64-4804827 bp Feature: gene Location: 4805130-4805264 bp Feature: gene Location: 4805658-4806806 bp Feature: gene Location: 5248808-5249272 bp Feature: gene Location: 5249334-5249480 bp Feature: gene Location: 5249501-5250439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5249507-5249594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5249507-5249594 bp Feature: domain Description: HNHc Note: nucleases Location: 5250152-5250320 bp Feature: domain Description: HNHc Note: nucleases Location: 52501 52-5250320 bp Feature: gene Location: 5250430-5251386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5250745-5251372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5250745-5251 372 bp Feature: gene Location: 5251644-5251829 bp Feature: gene Location: 5252116-5253753 bp Feature: gene Location: 5497499-5498437 bp Feature: domain Description: PstC Location: 5497520-5498417 bp Feature: domain Description: PstC Location: 5497520-549841 7 bp Feature: gene Location: 5498465-5499421 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 5498690-5499401 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 5498690-5499401 bp Feature: gene Location: 5499730-5500722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5499733-5500267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5499733-5500267 bp Feature: domain Description: GIIM Note: maturase Location: 5500330-5500558 bp Feature: domain Description: GIIM Note: maturase Location: 5500330-5500558 bp Feature: gene Location: 5501415-5502554 bp Feature: domain Description: APH Location: 5501496-5502204 bp Feature: domain Description: APH Location: 5501 496-5502204 bp Feature: gene Location: 5502551-5503486 bp Feature: domain Description: NTP_transferase Location: 5502575-5503337 bp Feature: domain Description: NTP_transferase Location: 5502575-5503337 bp Feature: gene Location: 5561220-5561708 bp Feature: gene Location: 5561963-5562229 bp Feature: gene Location: 5562268-5564085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5562532-5563351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5562532-5563351 bp Feature: domain Description: Intron_maturas2 Location: 5563423-5563726 bp Feature: domain Description: Intron_maturas2 Location: 5563423-5563726 bp Feature: domain Description: HNHc Note: nucleases Location: 5563906-5564050 bp Feature: domain Description: HNHc Note: nucleases Location: 5563906-5564050 bp Feature: gene Location: 5564176-5565459 bp Feature: domain Description: VirD4 Location: 5564179-5565355 bp Feature: domain Description: VirD4 Location: 55641 79-5565355 bp Feature: gene Location: 5565472-5565792 bp Feature: gene Location: 5576474-5577433 bp Feature: gene Location: 5577505-5577804 bp Feature: gene Location: 5578157-5580127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5578493-5579231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5578493-5579231 bp Feature: domain Description: HNHc Note: nucleases Location: 5579786-5579924 bp Feature: domain Description: HNHc Note: nucleases Location: 5579786-5579924 bp Feature: gene Location: 5580293-5581663 bp Feature: domain Description: TraC-F-type Location: 5580326-5581472 bp Feature: domain Description: TraC-F-type Location: 5580326-5581 472 bp Feature: gene Location: 5581667-5583403 bp Feature: domain Description: Spr Location: 5583014-5583377 bp Feature: domain Description: Spr Location: 558301 4-5583377 bp Feature: gene Location: 5589659-5596603 bp Feature: domain Description: LPD11 Location: 5592398-5592590 bp Feature: domain Description: LPD1 1 Location: 5592398-5592590 bp Feature: domain Description: YtxK Location: 5593241-5593991 bp Feature: domain Description: YtxK Location: 5593241 -5593991 bp Feature: domain Description: COG4646 Location: 5594060-5596448 bp Feature: domain Description: COG4646 Location: 5594060-5596448 bp Feature: gene Location: 5596774-5597019 bp Feature: gene Location: 5597103-5597681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5597364-5597622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5597364-5597622 bp Feature: gene Location: 5597782-5598975 bp Feature: domain Description: Integrase_DNA Location: 5597785-5597995 bp Feature: domain Description: Integrase_DNA Location: 5597785-5597995 bp Feature: domain Description: Phage_int_SAM_4 Location: 5598055-5598262 bp Feature: domain Description: Phage_int_SAM_4 Location: 5598055-5598262 bp Feature: domain Description: INT_ICEBs1_C_like Location: 5598364-5598928 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 5598364-5598928 bp Feature: gene Location: 5599257-5600267 bp Feature: domain Description: Rol_Rep_N Location: 5599260-5599491 bp Feature: domain Description: Rol_Rep_N Location: 5599260-5599491 bp Feature: domain Description: Rep_trans Location: 5599527-5600109 bp Feature: domain Description: Rep_trans Location: 5599527-56001 09 bp Feature: gene Location: 5605136-5606380 bp Feature: domain Description: IS285 Location: 5605205-5606372 bp Feature: domain Description: IS285 Location: 5605205-5606372 bp Feature: gene Location: 5606635-5606910 bp Feature: gene Location: 5607410-5608624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5607413-5607896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560741 3-5607896 bp Feature: domain Description: Intron_maturas2 Location: 5608004-5608220 bp Feature: domain Description: Intron_maturas2 Location: 5608004-5608220 bp Feature: domain Description: HNHc Note: nucleases Location: 5608400-5608586 bp Feature: domain Description: HNHc Note: nucleases Location: 5608400-5608586 bp Feature: gene Location: 5608768-5610126 bp Feature: domain Description: HepA Location: 5609011-5609326 bp Feature: domain Description: HepA Location: 560901 1 -5609326 bp Feature: gene Location: 5610126-5610458 bp Feature: domain Description: MobC Location: 5610318-5610426 bp Feature: domain Description: MobC Location: 561 031 8-561 0426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BglG (COG3711), PTS_EIIA_2 (pfam00359), RVT-GII, INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HTH_21 (pfam13276), YrpB (COG2070)
SoxR (TIGR01950), YitT_membrane (pfam02588), YhcG (COG4804), YhcG_C, E_set_CDase_PDE_N (cd02857), AmyAc_CMD (cd11338), PurR (COG1609), HNHc (smart00507), TraC-F-type (TIGR02746), DUF3851 (pfam12962)
YicI (COG1501), IS285 (COG3328), recomb_XerD (TIGR02225), RVT-CRISPR, NlpD (COG0739), Spr (COG0791), VirB4_CagE (TIGR00929), SAPR (COG3947), YwqE (COG4464), group_II_RT_mat (TIGR04416)
Virulence_RhuM (pfam13310), RVT-Retrons, COG3943 (Uncharacterized conserved protein ), HTH_Tnp_1 (pfam01527), CHAP (pfam05257), YcgL (pfam05166), RVT-DGRs, Avd_like (cd16376), PRK14717 (putative glycine/sarcosine/betaine reductase complex protein A; Provisional), PRK13265 (glycine/sarcosine/betaine reductase complex protein A; Reviewed)
N6_N4_Mtase (pfam01555), Intron_maturas2 (pfam01348), 7tmA_UII-R (cd14999), PstC (COG0573), PBP2_phosphate_like_1 (cd13653), APH (pfam01636), NTP_transferase (pfam00483), VirD4 (COG3505), LPD11 (pfam18824), YtxK (COG0827)
COG4646 (Adenine-specific DNA methylase, N12 class ), Integrase_DNA (pfam02920), Phage_int_SAM_4 (pfam13495), INT_ICEBs1_C_like (cd01189), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), HepA (COG0553), MobC (pfam05713)