myRT

myRT report for GCA_006540665.2_ASM654066v2

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Seq: SUOC02000059.1 (12978 bp)
Overview 1 RT 1: 1751-7103 bp Neighborhood of RT #1 [1751, 7240] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 1751-3022 bp Feature: domain Description: umuC Location: 1754-3014 bp Feature: domain Description: umuC Location: 1 754-301 4 bp Feature: gene Location: 3022-3705 bp Feature: domain Description: PRK10276 Location: 3325-3688 bp Feature: domain Description: PRK1 0276 Location: 3325-3688 bp Feature: gene Location: 3859-5346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4264-4954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4264-4954 bp Feature: gene Location: 5595-6566 bp Feature: domain Description: StbA Location: 5598-6543 bp Feature: domain Description: StbA Location: 5598-6543 bp Feature: gene Location: 6569-7240 bp Feature: domain Description: Plasmid_stab_B Location: 6584-6791 bp Feature: domain Description: Plasmid_stab_B Location: 6584-6791 bp Feature: domain Description: Plasmid_stab_B Location: 6896-7103 bp Feature: domain Description: Plasmid_stab_B Location: 6896-71 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: SUOC02000040.1 (33506 bp)
Overview 1 RT 1: 29515-32254 bp Neighborhood of RT #1 [29515, 32254] PRK10276 RVT-GII Feature: gene Location: 29515-29880 bp Feature: domain Description: PRK10276 Location: 29560-29683 bp Feature: domain Description: PRK102 76 Location: 2 9560-2 9683 bp Feature: gene Location: 29837-30076 bp Feature: gene Location: 30150-31634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30552-31242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30552 -312 42 bp Feature: gene Location: 31688-31921 bp Feature: gene Location: 32039-32254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: SUOC02000037.1 (36405 bp)
Overview 1 RT 1: 28945-35813 bp Neighborhood of RT #1 [28945, 35815] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 28945-29673 bp Feature: domain Description: FimC Location: 28993-29656 bp Feature: domain Description: FimC Location: 28993 -29656 bp Feature: gene Location: 29705-32314 bp Feature: domain Description: FimD Location: 29762-32303 bp Feature: domain Description: FimD Location: 29762-3 23 03 bp Feature: gene Location: 32314-34392 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 32722-33166 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 2722-3 3 166 bp Feature: gene Location: 34449-34889 bp Feature: domain Description: Integrase_1 Location: 34455-34671 bp Feature: domain Description: Integrase_1 Location: 3 4455-3 4671 bp Feature: gene Location: 35150-35815 bp Feature: domain Description: INT_P4_C Location: 35255-35813 bp Feature: domain Description: INT_P4_C Location: 3 5255-3 5813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)