myRT

myRT report for GCA_006540815.2_ASM654081v2

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Seq: SUOP02000102.1 (1070 bp)
Overview 1 RT 1: 1-919 bp Neighborhood of RT #1 [1, 1068] RVT-GII Feature: gene Location: 1-1068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229-91 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SUOP02000065.1 (12978 bp)
Overview 1 RT 1: 1751-7103 bp Neighborhood of RT #1 [1751, 7240] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 1751-3022 bp Feature: domain Description: umuC Location: 1754-3014 bp Feature: domain Description: umuC Location: 1754-3014 bp Feature: gene Location: 3022-3729 bp Feature: domain Description: PRK10276 Location: 3349-3712 bp Feature: domain Description: PRK102 76 Location: 3349-3712 bp Feature: gene Location: 3859-5346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4264-4954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 64-4954 bp Feature: gene Location: 5595-6566 bp Feature: domain Description: StbA Location: 5598-6543 bp Feature: domain Description: StbA Location: 5598-6543 bp Feature: gene Location: 6569-7240 bp Feature: domain Description: Plasmid_stab_B Location: 6584-6791 bp Feature: domain Description: Plasmid_stab_B Location: 6584-6791 bp Feature: domain Description: Plasmid_stab_B Location: 6896-7103 bp Feature: domain Description: Plasmid_stab_B Location: 6896-7103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: SUOP02000039.1 (48609 bp)
Overview 1 RT 1: 636-7489 bp Neighborhood of RT #1 [636, 7506] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 636-1301 bp Feature: domain Description: INT_P4_C Location: 741-1299 bp Feature: domain Description: INT_P4_C Location: 741-1299 bp Feature: gene Location: 1562-2002 bp Feature: domain Description: Integrase_1 Location: 1568-1784 bp Feature: domain Description: Integrase_1 Location: 1568-1784 bp Feature: gene Location: 2059-4137 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2467-2911 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2467-2911 bp Feature: gene Location: 4137-6746 bp Feature: domain Description: FimD Location: 4194-6735 bp Feature: domain Description: FimD Location: 4194-673 5 bp Feature: gene Location: 6778-7506 bp Feature: domain Description: FimC Location: 6826-7489 bp Feature: domain Description: FimC Location: 6826-7489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)