myRT

myRT report for GCA_006541985.2_ASM654198v2

Download annotations/find similar RTs

Seq: SUOU02000030.1 (68231 bp)
Overview 1 RT 1: 11500-14552 bp Neighborhood of RT #1 [11500, 14552] PRK10276 RVT-GII Feature: gene Location: 11500-11925 bp Feature: domain Description: PRK10276 Location: 11503-11911 bp Feature: domain Description: PRK1 0276 Location: 1 1 503-1 1 91 1 bp Feature: gene Location: 12043-12276 bp Feature: gene Location: 12327-13814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12732-13422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2732-1 3422 bp Feature: gene Location: 14048-14278 bp Feature: gene Location: 14370-14552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: SUOU02000007.1 (229448 bp)
Overview 1 RT 1: 546-7399 bp Neighborhood of RT #1 [546, 7416] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 546-1211 bp Feature: domain Description: INT_P4_C Location: 651-1209 bp Feature: domain Description: INT_P4_C Location: 651-12 09 bp Feature: gene Location: 1472-1912 bp Feature: domain Description: Integrase_1 Location: 1478-1694 bp Feature: domain Description: Integrase_1 Location: 1478-1694 bp Feature: gene Location: 1969-4047 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2377-2821 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 377-2 82 1 bp Feature: gene Location: 4047-6656 bp Feature: domain Description: FimD Location: 4104-6645 bp Feature: domain Description: FimD Location: 4104-6645 bp Feature: gene Location: 6688-7416 bp Feature: domain Description: FimC Location: 6721-7399 bp Feature: domain Description: FimC Location: 672 1-7399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: SUOU02000055.1 (9027 bp)
Overview 1 RT 1: 6813-8956 bp Neighborhood of RT #1 [6813, 9024] PRK09692 INT_P4_C RVT-UG3 Feature: gene Location: 6813-7304 bp Feature: domain Description: PRK09692 Location: 6819-7290 bp Feature: domain Description: PRK09692 Location: 6819-7290 bp Feature: gene Location: 7317-7982 bp Feature: domain Description: INT_P4_C Location: 7425-7956 bp Feature: domain Description: INT_P4_C Location: 7425-7956 bp Feature: gene Location: 8161-9024 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8449-8956 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8449-8956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), INT_P4_C (cd00801), RVT-UG3