myRT

myRT report for GCA_006542035.2_ASM654203v2

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Seq: SUOY02000008.1 (205162 bp)
Overview 1 RT 1: 1-1230 bp Neighborhood of RT #1 [1, 1394] RVT-GII PRK10276 Feature: gene Location: 1-750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-358 bp Feature: gene Location: 827-1066 bp Feature: gene Location: 1023-1394 bp Feature: domain Description: PRK10276 Location: 1068-1230 bp Feature: domain Description: PRK1 0276 Location: 1 068-1 230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: SUOY02000029.1 (70778 bp)
Overview 1 RT 1: 32010-38878 bp Neighborhood of RT #1 [32010, 38880] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 32010-32738 bp Feature: domain Description: FimC Location: 32058-32721 bp Feature: domain Description: FimC Location: 32 058-32 72 1 bp Feature: gene Location: 32770-35379 bp Feature: domain Description: FimD Location: 32827-35368 bp Feature: domain Description: FimD Location: 32 82 7-35368 bp Feature: gene Location: 35379-37457 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35787-36231 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35787-362 31 bp Feature: gene Location: 37514-37954 bp Feature: domain Description: Integrase_1 Location: 37520-37736 bp Feature: domain Description: Integrase_1 Location: 3752 0-37736 bp Feature: gene Location: 38215-38880 bp Feature: domain Description: INT_P4_C Location: 38320-38878 bp Feature: domain Description: INT_P4_C Location: 3832 0-38878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: SUOY02000078.1 (8968 bp)
Overview 1 RT 1: 5764-8573 bp Neighborhood of RT #1 [5764, 8965] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5764-6435 bp Feature: domain Description: Plasmid_stab_B Location: 5779-5986 bp Feature: domain Description: Plasmid_stab_B Location: 5779-5986 bp Feature: domain Description: Plasmid_stab_B Location: 6091-6298 bp Feature: domain Description: Plasmid_stab_B Location: 6091-6298 bp Feature: gene Location: 6438-7409 bp Feature: domain Description: StbA Location: 6441-7386 bp Feature: domain Description: StbA Location: 6441-73 86 bp Feature: gene Location: 7658-8965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7883-8573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7883 -8573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: SUOY02000020.1 (88276 bp)
Overview 1 RT 1: 86908-88272 bp Neighborhood of RT #1 [86908, 88274] RVT-GII Feature: gene Location: 86908-87054 bp Feature: gene Location: 87223-87456 bp Feature: gene Location: 87507-88274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87912-88272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87912-88272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII