myRT

myRT report for GCA_006542165.2_ASM654216v2

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Seq: SUPA02000012.1 (114882 bp)
Overview 1 RT 1: 1-2287 bp Neighborhood of RT #1 [1, 2361] RVT-GII PRK10276 Terminase_2 Feature: gene Location: 1-1311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229-91 9 bp Feature: gene Location: 1390-1719 bp Feature: domain Description: PRK10276 Location: 1396-1549 bp Feature: domain Description: PRK1 0276 Location: 1 396-1 549 bp Feature: gene Location: 1777-2361 bp Feature: domain Description: Terminase_2 Location: 1822-2287 bp Feature: domain Description: Terminase_2 Location: 1 822-2287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Terminase_2 (pfam03592)

Seq: SUPA02000037.1 (54058 bp)
Overview 1 RT 1: 18131-24984 bp Neighborhood of RT #1 [18131, 25001] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 18131-18796 bp Feature: domain Description: INT_P4_C Location: 18236-18794 bp Feature: domain Description: INT_P4_C Location: 182 36-18794 bp Feature: gene Location: 19057-19497 bp Feature: domain Description: Integrase_1 Location: 19063-19279 bp Feature: domain Description: Integrase_1 Location: 19063-192 79 bp Feature: gene Location: 19554-21632 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 19962-20406 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 19962 -2 0406 bp Feature: gene Location: 21632-24241 bp Feature: domain Description: FimD Location: 21689-24230 bp Feature: domain Description: FimD Location: 2 1689-2 42 30 bp Feature: gene Location: 24273-25001 bp Feature: domain Description: FimC Location: 24321-24984 bp Feature: domain Description: FimC Location: 2 432 1-2 4984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: SUPA02000183.1 (728 bp)
Overview 1 RT 1: 3-690 bp Neighborhood of RT #1 [3, 692] RVT-GII Feature: gene Location: 3-692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SUPA02000215.1 (510 bp)
Overview 1 RT 1: 3-360 bp Neighborhood of RT #1 [3, 509] RVT-GII Feature: gene Location: 3-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII