myRT

myRT report for GCA_006543605.1_ASM654360v1

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Seq: RRBB01000559.1 (1973 bp)
Overview 1 RT 1: 105-1583 bp Neighborhood of RT #1 [105, 1627] DDE_3 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-338 bp Feature: domain Description: DDE_3 Location: 129-336 bp Feature: domain Description: DDE_3 Location: 1 29-336 bp Feature: gene Location: 491-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-896 bp Feature: domain Description: Intron_maturas2 Location: 947-1229 bp Feature: domain Description: Intron_maturas2 Location: 947-1 229 bp Feature: domain Description: HNHc Note: nucleases Location: 1397-1583 bp Feature: domain Description: HNHc Note: nucleases Location: 1 397-1 583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RRBB01000448.1 (4134 bp)
Overview 1 RT 1: 165-4033 bp Neighborhood of RT #1 [165, 4131] CodB Glyoxalase RVT_N RVT-GII excise Feature: gene Location: 165-1586 bp Feature: domain Description: CodB Location: 210-1524 bp Feature: domain Description: CodB Location: 2 10-152 4 bp Feature: gene Location: 1766-2173 bp Feature: domain Description: Glyoxalase Location: 1784-2147 bp Feature: domain Description: Glyoxalase Location: 1784-2 147 bp Feature: gene Location: 3075-3473 bp Feature: domain Description: RVT_N Location: 3123-3357 bp Feature: domain Description: RVT_N Location: 312 3-3357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3420-3468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 0-3468 bp Feature: gene Location: 3595-4131 bp Feature: domain Description: excise Location: 3919-4033 bp Feature: domain Description: excise Location: 3919-4033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CodB (COG1457), Glyoxalase (pfam00903), RVT_N (pfam13655), RVT-GII, excise (TIGR01764)

Seq: RRBB01000515.1 (2575 bp)
Overview 1 RT 1: 250-2146 bp Neighborhood of RT #1 [250, 2214] RVT-GII RVT-GII GIIM Feature: gene Location: 250-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511-895 bp Feature: gene Location: 1582-2214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-183 7 bp Feature: domain Description: GIIM Note: maturase Location: 1921-2146 bp Feature: domain Description: GIIM Note: maturase Location: 1921-2146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RRBB01000373.1 (6774 bp)
Overview 1 RT 1: 477-1508 bp Neighborhood of RT #1 [477, 1508] RVT-GII Feature: gene Location: 477-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 720-831 bp Feature: gene Location: 1128-1295 bp Feature: gene Location: 1308-1508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01000124.1 (31856 bp)
Overview 1 RT 1: 172-4917 bp Neighborhood of RT #1 [172, 5843] RVT-GII Intron_maturas2 HNHc DDE_Tnp_ISAZ013 FtsK Feature: gene Location: 172-1956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-125 5 bp Feature: domain Description: Intron_maturas2 Location: 1372-1588 bp Feature: domain Description: Intron_maturas2 Location: 1372-15 88 bp Feature: domain Description: HNHc Note: nucleases Location: 1768-1936 bp Feature: domain Description: HNHc Note: nucleases Location: 1768-1936 bp Feature: gene Location: 2199-2750 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 2202-2721 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 2202-2721 bp Feature: gene Location: 3489-5843 bp Feature: domain Description: FtsK Location: 4356-4917 bp Feature: domain Description: FtsK Location: 435 6-4917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_Tnp_ISAZ013 (pfam07592), FtsK (COG1674)

Seq: RRBB01000702.1 (975 bp)
Overview 1 RT 1: 2-323 bp Neighborhood of RT #1 [2, 715] RVT-GII Feature: gene Location: 2-715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01000507.1 (2679 bp)
Overview 1 RT 1: 2-2677 bp Neighborhood of RT #1 [2, 2677] RVT-GII Feature: gene Location: 2-259 bp Feature: gene Location: 794-2269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1208-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1208-1898 bp Feature: gene Location: 2351-2677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01000644.1 (1280 bp)
Overview 1 RT 1: 378-1275 bp Neighborhood of RT #1 [378, 1277] RVT-GII Feature: gene Location: 378-1277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78 6-1275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01000478.1 (3386 bp)
Overview 1 RT 1: 46-3075 bp Neighborhood of RT #1 [46, 3110] DUF5372 RVT-GII GIIM PRK13353 PRK13353 Feature: gene Location: 46-396 bp Feature: gene Location: 430-666 bp Feature: domain Description: DUF5372 Location: 448-595 bp Feature: domain Description: DUF5372 Location: 448-59 5 bp Feature: gene Location: 681-2117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702-1329 bp Feature: domain Description: GIIM Note: maturase Location: 1395-1629 bp Feature: domain Description: GIIM Note: maturase Location: 139 5-1629 bp Feature: gene Location: 2183-2596 bp Feature: gene Location: 2652-3110 bp Feature: domain Description: PRK13353 Location: 2676-2772 bp Feature: domain Description: PRK13353 Location: 2676-2772 bp Feature: domain Description: PRK13353 Location: 2778-3075 bp Feature: domain Description: PRK13353 Location: 2778-3075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388), PRK13353 (aspartate ammonia-lyase; Provisional)

Seq: RRBB01000565.1 (1931 bp)
Overview 1 RT 1: 79-1183 bp Neighborhood of RT #1 [79, 1554] RVT-GII Feature: gene Location: 79-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493-1183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493-1183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01001200.1 (250 bp)
Overview 1 RT 1: 2-128 bp Neighborhood of RT #1 [2, 217] RVT-GII Feature: gene Location: 2-217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01000370.1 (6809 bp)
Overview 1 RT 1: 3487-6039 bp Neighborhood of RT #1 [3487, 6539] RVT_N RVT-GII GIIM Feature: gene Location: 3487-3660 bp Feature: gene Location: 3673-4047 bp Feature: gene Location: 4734-6539 bp Feature: domain Description: RVT_N Location: 4779-5016 bp Feature: domain Description: RVT_N Location: 4779-5016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5076-5739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5076-5739 bp Feature: domain Description: GIIM Note: maturase Location: 5805-6039 bp Feature: domain Description: GIIM Note: maturase Location: 5805-6039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: RRBB01000620.1 (1441 bp)
Overview 1 RT 1: 2-1298 bp Neighborhood of RT #1 [2, 1399] RVT-GII Feature: gene Location: 2-145 bp Feature: gene Location: 710-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RRBB01000228.1 (16547 bp)
Overview 1 RT 1: 14015-16084 bp Neighborhood of RT #1 [14015, 16317] RVT-Retrons Feature: gene Location: 14015-14566 bp Feature: gene Location: 14087-15199 bp Feature: gene Location: 15229-16317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15490-16084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15490-16084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons