myRT

myRT report for GCA_006546695.1_ASM654669v1

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Seq: VIBE01000014.1 (113084 bp)
Overview 1 RT 1: 66792-72680 bp Neighborhood of RT #1 [66792, 72688] RVT-UG2 PBP2_FutA1_ilke FbpB Feature: gene Location: 66792-66986 bp Feature: gene Location: 67002-67280 bp Feature: gene Location: 67875-69347 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 68067-68973 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 68067-68973 bp Feature: gene Location: 69978-70991 bp Feature: domain Description: PBP2_FutA1_ilke Location: 70050-70983 bp Feature: domain Description: PBP2_FutA1 _ilke Location: 70050-70983 bp Feature: gene Location: 71000-72688 bp Feature: domain Description: FbpB Location: 71069-72680 bp Feature: domain Description: FbpB Location: 71 069-72680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, PBP2_FutA1_ilke (cd13542), FbpB (COG1178)

Seq: VIBE01000002.1 (346364 bp)
Overview 1 RT 1: 195118-203253 bp Neighborhood of RT #1 [195118, 204353] PIN_NicB-like CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III RAMP_I_III RAMP_I_III RAMP_I_III TIGR03986 RAMP_I_III Feature: gene Location: 195118-195762 bp Feature: domain Description: PIN_NicB-like Location: 195157-195610 bp Feature: domain Description: PIN_NicB-like Location: 195157-195610 bp Feature: gene Location: 195875-196783 bp Feature: domain Description: CRISPR_Cas6 Location: 196421-196763 bp Feature: domain Description: CRISPR_Cas6 Location: 19642 1-196763 bp Feature: gene Location: 197621-199222 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 197624-198083 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 19762 4-198083 bp Feature: domain Description: Cas1_I-II-III Location: 198227-199178 bp Feature: domain Description: Cas1_I-II-III Location: 1982 2 7-199178 bp Feature: gene Location: 200083-202710 bp Feature: domain Description: RAMP_I_III Location: 200122-200506 bp Feature: domain Description: RAMP_I_III Location: 2 0012 2 -2 00506 bp Feature: domain Description: RAMP_I_III Location: 200836-201265 bp Feature: domain Description: RAMP_I_III Location: 2 00836-2 012 65 bp Feature: domain Description: RAMP_I_III Location: 201601-201853 bp Feature: domain Description: RAMP_I_III Location: 2 01601-2 01853 bp Feature: domain Description: TIGR03986 Location: 202039-202306 bp Feature: domain Description: TIGR03986 Location: 2 02 039-2 02 306 bp Feature: gene Location: 202707-204353 bp Feature: domain Description: RAMP_I_III Location: 202755-203253 bp Feature: domain Description: RAMP_I_III Location: 2 02 755-2 032 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_NicB-like (cd18722), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), RAMP_I_III (cl21471), TIGR03986 (CRISPR-associated protein)