myRT

myRT report for GCA_006547345.1_ASM654734v1

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Seq: VHLD01000045.1 (63924 bp)
Overview 1 RT 1: 42617-49485 bp Neighborhood of RT #1 [42617, 49664] RVT-Retrons COG3791 EpmB Feature: gene Location: 42617-44482 bp Feature: gene Location: 44479-46077 bp Feature: gene Location: 46256-47539 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46721-47324 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46721 -47324 bp Feature: gene Location: 47548-47967 bp Feature: domain Description: COG3791 Location: 47572-47929 bp Feature: domain Description: COG3791 Location: 47572-47929 bp Feature: gene Location: 48336-49664 bp Feature: domain Description: EpmB Location: 48399-49485 bp Feature: domain Description: EpmB Location: 48399-49485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VHLD01000114.1 (26131 bp)
Overview 1 RT 1: 677-3873 bp Neighborhood of RT #1 [677, 4031] RVT-GII GIIM COG3617 P63C Feature: gene Location: 677-1987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962 -1580 bp Feature: domain Description: GIIM Note: maturase Location: 1652-1874 bp Feature: domain Description: GIIM Note: maturase Location: 1652 -1874 bp Feature: gene Location: 2498-2812 bp Feature: gene Location: 3255-4031 bp Feature: domain Description: COG3617 Location: 3261-3564 bp Feature: domain Description: COG3617 Location: 32 61-3564 bp Feature: domain Description: P63C Location: 3606-3873 bp Feature: domain Description: P63C Location: 3606-3873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VHLD01000005.1 (169738 bp)
Overview 1 RT 1: 2665-15383 bp Neighborhood of RT #1 [2665, 15472] BetA BetA BetA DAP2 RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 2665-4188 bp Feature: domain Description: BetA Location: 2680-3175 bp Feature: domain Description: BetA Location: 2680-3 175 bp Feature: domain Description: BetA Location: 3316-3619 bp Feature: domain Description: BetA Location: 3 3 16-3 619 bp Feature: domain Description: BetA Location: 3754-4168 bp Feature: domain Description: BetA Location: 3 754-4168 bp Feature: gene Location: 4334-5224 bp Feature: domain Description: DAP2 Location: 4460-5039 bp Feature: domain Description: DAP2 Location: 4460-503 9 bp Feature: gene Location: 5228-6685 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5786-6428 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5786-6428 bp Feature: gene Location: 7086-8939 bp Feature: gene Location: 8936-15472 bp Feature: domain Description: WD40 Location: 9095-9791 bp Feature: domain Description: WD40 Location: 9095-9791 bp Feature: domain Description: HEAT_2 Location: 10013-10196 bp Feature: domain Description: HEAT_2 Location: 10013 -10196 bp Feature: domain Description: HEAT_2 Location: 10778-11027 bp Feature: domain Description: HEAT_2 Location: 10778-11027 bp Feature: domain Description: HEAT_2 Location: 11072-11237 bp Feature: domain Description: HEAT_2 Location: 11072-1123 7 bp Feature: domain Description: HEAT_2 Location: 11267-11498 bp Feature: domain Description: HEAT_2 Location: 11267-11498 bp Feature: domain Description: HEAT_2 Location: 11936-12089 bp Feature: domain Description: HEAT_2 Location: 1193 6-12089 bp Feature: domain Description: HEAT_2 Location: 12197-12359 bp Feature: domain Description: HEAT_2 Location: 12197-123 59 bp Feature: domain Description: HEAT_2 Location: 12719-12908 bp Feature: domain Description: HEAT_2 Location: 12719-12908 bp Feature: domain Description: HEAT_2 Location: 12953-13160 bp Feature: domain Description: HEAT_2 Location: 12953 -13 160 bp Feature: domain Description: HEAT_2 Location: 13325-13559 bp Feature: domain Description: HEAT_2 Location: 13 3 25-13 559 bp Feature: domain Description: HEAT_2 Location: 13622-13781 bp Feature: domain Description: HEAT_2 Location: 13 622-13 781 bp Feature: domain Description: HEAT_2 Location: 14171-14387 bp Feature: domain Description: HEAT_2 Location: 14171-143 87 bp Feature: domain Description: HEAT_2 Location: 14900-15119 bp Feature: domain Description: HEAT_2 Location: 14900-15119 bp Feature: domain Description: HEAT_2 Location: 15245-15383 bp Feature: domain Description: HEAT_2 Location: 15245-153 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VHLD01000166.1 (8715 bp)
Overview 1 RT 1: 715-5647 bp Neighborhood of RT #1 [715, 5658] COG4941 RVT-Retrons RNase_HI_like Feature: gene Location: 715-1143 bp Feature: gene Location: 1777-2973 bp Feature: domain Description: COG4941 Location: 1783-2953 bp Feature: domain Description: COG4 94 1 Location: 1783-2953 bp Feature: gene Location: 3342-4670 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3786-4440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3786-4 4 4 0 bp Feature: gene Location: 4772-4990 bp Feature: gene Location: 5020-5658 bp Feature: domain Description: RNase_HI_like Location: 5269-5647 bp Feature: domain Description: RNase_HI_like Location: 5269-564 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT