myRT

myRT report for GCA_006547355.1_ASM654735v1

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Seq: VHLC01000137.1 (19257 bp)
Overview 1 RT 1: 717-7572 bp Neighborhood of RT #1 [717, 7751] RVT-Retrons COG3791 EpmB EpmB Feature: gene Location: 717-2582 bp Feature: gene Location: 2579-4162 bp Feature: gene Location: 4341-5624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4806-5409 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4806-5409 bp Feature: gene Location: 5634-6053 bp Feature: domain Description: COG3791 Location: 5661-6015 bp Feature: domain Description: COG3791 Location: 5661 -601 5 bp Feature: gene Location: 6423-7751 bp Feature: domain Description: EpmB Location: 6486-6672 bp Feature: domain Description: EpmB Location: 6486-6672 bp Feature: domain Description: EpmB Location: 6816-7572 bp Feature: domain Description: EpmB Location: 681 6-7572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3791 (Uncharacterized conserved protein ), EpmB (COG1509)

Seq: VHLC01000050.1 (60311 bp)
Overview 1 RT 1: 41606-54399 bp Neighborhood of RT #1 [41606, 54419] WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA Feature: gene Location: 41606-48142 bp Feature: domain Description: WD40 Location: 41765-42461 bp Feature: domain Description: WD40 Location: 41765-42 461 bp Feature: domain Description: HEAT_2 Location: 42683-42866 bp Feature: domain Description: HEAT_2 Location: 42 683-42 866 bp Feature: domain Description: HEAT_2 Location: 43448-43697 bp Feature: domain Description: HEAT_2 Location: 43448-43697 bp Feature: domain Description: HEAT_2 Location: 43937-44168 bp Feature: domain Description: HEAT_2 Location: 43937-44168 bp Feature: domain Description: HEAT_2 Location: 44606-44759 bp Feature: domain Description: HEAT_2 Location: 44606-44759 bp Feature: domain Description: HEAT_2 Location: 44867-45029 bp Feature: domain Description: HEAT_2 Location: 44867-4502 9 bp Feature: domain Description: HEAT_2 Location: 45389-45578 bp Feature: domain Description: HEAT_2 Location: 45389-45578 bp Feature: domain Description: HEAT_2 Location: 45623-45830 bp Feature: domain Description: HEAT_2 Location: 4562 3-45830 bp Feature: domain Description: HEAT_2 Location: 45995-46229 bp Feature: domain Description: HEAT_2 Location: 45995-462 2 9 bp Feature: domain Description: HEAT_2 Location: 46841-47057 bp Feature: domain Description: HEAT_2 Location: 46841-47057 bp Feature: domain Description: HEAT_2 Location: 47537-47789 bp Feature: domain Description: HEAT_2 Location: 47537-47789 bp Feature: domain Description: HEAT_2 Location: 47915-48053 bp Feature: domain Description: HEAT_2 Location: 47915-48053 bp Feature: gene Location: 48139-49992 bp Feature: gene Location: 50393-51850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50951-51593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50951-51593 bp Feature: gene Location: 51854-52744 bp Feature: domain Description: DAP2 Location: 51980-52562 bp Feature: domain Description: DAP2 Location: 51980-52 562 bp Feature: gene Location: 52896-54419 bp Feature: domain Description: BetA Location: 52911-53850 bp Feature: domain Description: BetA Location: 52 911-53850 bp Feature: domain Description: BetA Location: 53985-54399 bp Feature: domain Description: BetA Location: 53985-54399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), RVT-Retrons, DAP2 (COG1506), BetA (COG2303)

Seq: VHLC01000003.1 (180654 bp)
Overview 1 RT 1: 8669-14214 bp Neighborhood of RT #1 [8669, 14214] RVT-UG12 Feature: gene Location: 8669-10117 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8675-8927 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8675-8927 bp Feature: gene Location: 11253-12599 bp Feature: gene Location: 12889-14214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: VHLC01000165.1 (12067 bp)
Overview 1 RT 1: 1215-6658 bp Neighborhood of RT #1 [1215, 6669] TIGR02267 COG4941 RVT-Retrons COG4127 RNase_HI_like Feature: gene Location: 1215-1592 bp Feature: domain Description: TIGR02267 Location: 1218-1584 bp Feature: domain Description: TIGR02267 Location: 1218-1584 bp Feature: gene Location: 1995-3266 bp Feature: domain Description: COG4941 Location: 2001-3171 bp Feature: domain Description: COG4 94 1 Location: 2001-3171 bp Feature: gene Location: 3635-4963 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4079-4733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 079-4 733 bp Feature: gene Location: 4980-6002 bp Feature: domain Description: COG4127 Location: 5001-5988 bp Feature: domain Description: COG4 127 Location: 5001-5988 bp Feature: gene Location: 6031-6669 bp Feature: domain Description: RNase_HI_like Location: 6280-6658 bp Feature: domain Description: RNase_HI_like Location: 6280-6658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02267 (DUSAM domain), COG4941 (Predicted RNA polymerase sigma factor, contains C-terminal TPR domain ), RVT-Retrons, COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), RNase_HI_like (cd09279)