myRT

myRT report for GCA_006716645.1_ASM671664v1

Download annotations/find similar RTs

Seq: VFPL01000001.1 (5185936 bp)
Overview 1 RT 1: 1452028-1457747 bp 2 RT 2: 1500976-1511340 bp 3 RT 3: 2768721-2772296 bp 4 RT 4: 2791257-2799981 bp 5 RT 5: 3293534-3300226 bp 6 RT 6: 3423928-3431912 bp 7 RT 7: 4940807-4946483 bp Neighborhood of RT #1 [1452028, 1457747] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #2 [1500976, 1511348] HTH_3 RVT-Retrons TPR TPR TPR RVT-GII GIIM Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like HTH_17 Neighborhood of RT #3 [2768721, 2772296] RVT-Retrons glucose_DH Neighborhood of RT #4 [2791257, 2799981] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT-GII group_II_RT_mat HNHc Bac_Flav_CT_G Neighborhood of RT #5 [3293534, 3300226] COG2905 RVT-GII GIIM Peptidase_M49 Peptidase_M49 Neighborhood of RT #6 [3423928, 3431935] NrdG TPR PD40 PD40 PD40 OmpA RVT-GII GIIM alaS Neighborhood of RT #7 [4940807, 4947772] DUF2154 DUF4964 DUF5127 DUF4965 DUF1793 RVT-GII GIIM FSAP_sig_propep Feature: gene Location: 1452028-1452204 bp Feature: gene Location: 1452218-1454173 bp Feature: domain Description: Bac_Flav_CT_G Location: 1452305-1454153 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 452305-1 4541 53 bp Feature: gene Location: 1454753-1456417 bp Feature: domain Description: RVT_N Location: 1454804-1455047 bp Feature: domain Description: RVT_N Location: 1 454804-1 455047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1455092-1455740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 455092-1 455740 bp Feature: domain Description: GIIM Note: maturase Location: 1455800-1456028 bp Feature: domain Description: GIIM Note: maturase Location: 1 455800-1 456028 bp Feature: gene Location: 1456414-1457088 bp Feature: domain Description: Bac_Flav_CT_G Location: 1456525-1456939 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 456525-1 456939 bp Feature: gene Location: 1457085-1457747 bp Feature: gene Location: 1500976-1501215 bp Feature: gene Location: 1501252-1501536 bp Feature: domain Description: HTH_3 Location: 1501273-1501405 bp Feature: domain Description: HTH_3 Location: 1 501 273-1 501 405 bp Feature: gene Location: 1501539-1502408 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1501698-1502220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 501 698-1 502220 bp Feature: gene Location: 1502824-1505679 bp Feature: domain Description: TPR Location: 1502845-1503100 bp Feature: domain Description: TPR Location: 1 502845-1 5031 00 bp Feature: domain Description: TPR Location: 1503448-1503823 bp Feature: domain Description: TPR Location: 1 503448-1 503823 bp Feature: domain Description: TPR Location: 1503889-1504207 bp Feature: domain Description: TPR Location: 1 503889-1 504207 bp Feature: gene Location: 1505970-1506131 bp Feature: gene Location: 1507555-1507731 bp Feature: gene Location: 1507747-1507923 bp Feature: gene Location: 1508093-1509400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1508333-1508951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 508333-1 508951 bp Feature: domain Description: GIIM Note: maturase Location: 1509008-1509215 bp Feature: domain Description: GIIM Note: maturase Location: 1 509008-1 50921 5 bp Feature: gene Location: 1509716-1510936 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1509746-1510004 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 509746-1 51 0004 bp Feature: domain Description: Phage_int_SAM_5 Location: 1510046-1510361 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 51 0046-1 51 0361 bp Feature: domain Description: INTN1_C_like Location: 1510418-1510892 bp Feature: domain Description: INTN1 _C_like Location: 1 51 041 8-1 51 0892 bp Feature: gene Location: 1511076-1511348 bp Feature: domain Description: HTH_17 Location: 1511193-1511340 bp Feature: domain Description: HTH_1 7 Location: 1 51 1 1 93-1 51 1 340 bp Feature: gene Location: 2768721-2769995 bp Feature: gene Location: 2769958-2770182 bp Feature: gene Location: 2770194-2771288 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2770419-2771034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 277041 9-2771 034 bp Feature: gene Location: 2771389-2771727 bp Feature: domain Description: glucose_DH Location: 2771395-2771656 bp Feature: domain Description: glucose_DH Location: 2771 395-2771 656 bp Feature: gene Location: 2772045-2772296 bp Feature: gene Location: 2791257-2791958 bp Feature: gene Location: 2791974-2792231 bp Feature: gene Location: 2792195-2794009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2792459-2793281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2792459-2793281 bp Feature: domain Description: Intron_maturas2 Location: 2793413-2793632 bp Feature: domain Description: Intron_maturas2 Location: 279341 3-2793632 bp Feature: domain Description: HNHc Note: nucleases Location: 2793839-2793992 bp Feature: domain Description: HNHc Note: nucleases Location: 2793839-2793992 bp Feature: gene Location: 2794560-2795165 bp Feature: domain Description: Bac_Flav_CT_G Location: 2794686-2795157 bp Feature: domain Description: Bac_Flav_CT_G Location: 2794686-27951 57 bp Feature: gene Location: 2795155-2796963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2795419-2796238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279541 9-2796238 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2796451-2796577 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2796451 -2796577 bp Feature: domain Description: HNHc Note: nucleases Location: 2796766-2796940 bp Feature: domain Description: HNHc Note: nucleases Location: 2796766-2796940 bp Feature: gene Location: 2797511-2799406 bp Feature: domain Description: Bac_Flav_CT_G Location: 2797523-2799392 bp Feature: domain Description: Bac_Flav_CT_G Location: 2797523-2799392 bp Feature: gene Location: 2799502-2799981 bp Feature: gene Location: 3293534-3295441 bp Feature: domain Description: COG2905 Location: 3293546-3295424 bp Feature: domain Description: COG2905 Location: 3293546-3295424 bp Feature: gene Location: 3295666-3295809 bp Feature: gene Location: 3296170-3297477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296410-3297028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329641 0-3297028 bp Feature: domain Description: GIIM Note: maturase Location: 3297085-3297292 bp Feature: domain Description: GIIM Note: maturase Location: 3297085-3297292 bp Feature: gene Location: 3297575-3299626 bp Feature: domain Description: Peptidase_M49 Location: 3298313-3298973 bp Feature: domain Description: Peptidase_M49 Location: 329831 3-3298973 bp Feature: domain Description: Peptidase_M49 Location: 3298988-3299441 bp Feature: domain Description: Peptidase_M49 Location: 3298988-3299441 bp Feature: gene Location: 3299753-3300226 bp Feature: gene Location: 3423928-3424548 bp Feature: domain Description: NrdG Location: 3423961-3424543 bp Feature: domain Description: NrdG Location: 3423961 -3424543 bp Feature: gene Location: 3424607-3426508 bp Feature: domain Description: TPR Location: 3424697-3424982 bp Feature: domain Description: TPR Location: 3424697-3424982 bp Feature: domain Description: PD40 Location: 3425414-3425525 bp Feature: domain Description: PD40 Location: 342541 4-3425525 bp Feature: domain Description: PD40 Location: 3425573-3425687 bp Feature: domain Description: PD40 Location: 3425573-3425687 bp Feature: domain Description: PD40 Location: 3425744-3425849 bp Feature: domain Description: PD40 Location: 3425744-3425849 bp Feature: domain Description: OmpA Location: 3426164-3426503 bp Feature: domain Description: OmpA Location: 34261 64-3426503 bp Feature: gene Location: 3427404-3428711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3427644-3428262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3427644-3428262 bp Feature: domain Description: GIIM Note: maturase Location: 3428319-3428526 bp Feature: domain Description: GIIM Note: maturase Location: 342831 9-3428526 bp Feature: gene Location: 3429072-3429257 bp Feature: gene Location: 3429275-3431935 bp Feature: domain Description: alaS Location: 3429278-3431912 bp Feature: domain Description: alaS Location: 3429278-3431 91 2 bp Feature: gene Location: 4940807-4941667 bp Feature: domain Description: DUF2154 Location: 4941380-4941566 bp Feature: domain Description: DUF21 54 Location: 4941 380-4941 566 bp Feature: gene Location: 4941926-4944388 bp Feature: domain Description: DUF4964 Location: 4941983-4942175 bp Feature: domain Description: DUF4964 Location: 4941 983-49421 75 bp Feature: domain Description: DUF5127 Location: 4942658-4943330 bp Feature: domain Description: DUF51 27 Location: 4942658-4943330 bp Feature: domain Description: DUF4965 Location: 4943345-4943849 bp Feature: domain Description: DUF4965 Location: 4943345-4943849 bp Feature: domain Description: DUF1793 Location: 4943867-4944356 bp Feature: domain Description: DUF1 793 Location: 4943867-4944356 bp Feature: gene Location: 4944485-4945792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4944725-4945343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4944725-4945343 bp Feature: domain Description: GIIM Note: maturase Location: 4945400-4945607 bp Feature: domain Description: GIIM Note: maturase Location: 4945400-4945607 bp Feature: gene Location: 4946154-4946297 bp Feature: gene Location: 4946366-4947772 bp Feature: domain Description: FSAP_sig_propep Location: 4946396-4946483 bp Feature: domain Description: FSAP_sig_propep Location: 4946396-4946483 bp Sorry, your browser does not support inline SVG.
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