myRT

myRT report for GCA_006788685.1_ASM678868v1

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Seq: VFXA01000001.1 (4961860 bp)
Overview 1 RT 1: 1356708-1361763 bp Neighborhood of RT #1 [1356708, 1361768] CZB CZB RVT-UG2 CbtA_toxin Feature: gene Location: 1356708-1357445 bp Feature: domain Description: CZB Location: 1357131-1357332 bp Feature: domain Description: CZB Location: 1 3571 31 -1 357332 bp Feature: gene Location: 1357642-1358340 bp Feature: domain Description: CZB Location: 1358014-1358197 bp Feature: domain Description: CZB Location: 1 35801 4-1 3581 97 bp Feature: gene Location: 1359587-1360873 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1359791-1360580 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 359791 -1 360580 bp Feature: gene Location: 1361020-1361181 bp Feature: gene Location: 1361514-1361768 bp Feature: domain Description: CbtA_toxin Location: 1361517-1361763 bp Feature: domain Description: CbtA_toxin Location: 1 361 51 7-1 361 763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CZB (pfam13682), RVT-UG2, CbtA_toxin (pfam06755)

Seq: VFXA01000002.1 (196854 bp)
Overview 1 RT 1: 8082-11742 bp 2 RT 2: 38572-41019 bp 3 RT 3: 139962-142402 bp 4 RT 4: 153028-156034 bp Neighborhood of RT #1 [8082, 11742] RVT-UG4 Neighborhood of RT #2 [38572, 41019] RVT-UG4 Neighborhood of RT #3 [139962, 142402] RVT-UG4 Neighborhood of RT #4 [153028, 156034] COG4584 PRK09183 RVT-GII GIIM Feature: gene Location: 8082-8663 bp Feature: gene Location: 8677-8880 bp Feature: gene Location: 8660-9658 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 9008-9446 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 9008-9446 bp Feature: gene Location: 9663-10523 bp Feature: gene Location: 11542-11742 bp Feature: gene Location: 38572-38856 bp Feature: gene Location: 39052-39273 bp Feature: gene Location: 39443-40441 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 39791-40229 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 39791-402 2 9 bp Feature: gene Location: 40221-40424 bp Feature: gene Location: 40438-41019 bp Feature: gene Location: 139962-140543 bp Feature: gene Location: 140557-140760 bp Feature: gene Location: 140540-141538 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 140888-141326 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 140888-14132 6 bp Feature: gene Location: 141543-142160 bp Feature: gene Location: 142139-142402 bp Feature: gene Location: 153028-153753 bp Feature: domain Description: COG4584 Location: 153043-153718 bp Feature: domain Description: COG4584 Location: 153043-153718 bp Feature: gene Location: 153753-154520 bp Feature: domain Description: PRK09183 Location: 153762-154500 bp Feature: domain Description: PRK09183 Location: 153762 -154500 bp Feature: gene Location: 154625-155545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154826-155438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15482 6-155438 bp Feature: gene Location: 155549-155860 bp Feature: domain Description: GIIM Note: maturase Location: 155555-155702 bp Feature: domain Description: GIIM Note: maturase Location: 155555-155702 bp Feature: gene Location: 155894-156034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional), RVT-GII, GIIM (pfam08388)