myRT

myRT report for GCA_006788725.1_ASM678872v1

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Seq: VFXD01000003.1 (103568 bp)
Overview 1 RT 1: 63496-65904 bp Neighborhood of RT #1 [63496, 66005] RVT-UG4 OmpT Feature: gene Location: 63496-63663 bp Feature: gene Location: 63682-63957 bp Feature: gene Location: 64105-64473 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 64108-64261 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 641 08-64261 bp Feature: gene Location: 64717-65598 bp Feature: gene Location: 65658-66005 bp Feature: domain Description: OmpT Location: 65784-65904 bp Feature: domain Description: OmpT Location: 65784-65904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, OmpT (COG4571)

Seq: VFXD01000002.1 (131369 bp)
Overview 1 RT 1: 23970-26162 bp 2 RT 2: 104567-108867 bp Neighborhood of RT #1 [23970, 26162] RVT-UG4 Neighborhood of RT #2 [104567, 108881] InsQ RVT-GII GIIM FimC Feature: gene Location: 23970-24317 bp Feature: gene Location: 24351-25175 bp Feature: gene Location: 25180-25752 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 25186-25540 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 5186-2 5540 bp Feature: gene Location: 25753-25998 bp Feature: gene Location: 26007-26162 bp Feature: gene Location: 104567-105433 bp Feature: domain Description: InsQ Location: 104591-105308 bp Feature: domain Description: InsQ Location: 104591-105308 bp Feature: gene Location: 105747-105968 bp Feature: gene Location: 106039-107277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106270-106882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062 70-106882 bp Feature: domain Description: GIIM Note: maturase Location: 106945-107146 bp Feature: domain Description: GIIM Note: maturase Location: 106945-107146 bp Feature: gene Location: 107383-107808 bp Feature: gene Location: 108132-108881 bp Feature: domain Description: FimC Location: 108213-108867 bp Feature: domain Description: FimC Location: 1082 13-108867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, InsQ (COG0675), RVT-GII, GIIM (pfam08388), FimC (COG3121)

Seq: VFXD01000001.1 (4949205 bp)
Overview 1 RT 1: 2721931-2728329 bp Neighborhood of RT #1 [2721931, 2728329] HTH_XRE RVT-Retrons Feature: gene Location: 2721931-2722257 bp Feature: gene Location: 2722309-2722599 bp Feature: domain Description: HTH_XRE Location: 2722321-2722486 bp Feature: domain Description: HTH_XRE Location: 27223 21-2722486 bp Feature: gene Location: 2722634-2723551 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2722730-2723297 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 272273 0-2723 297 bp Feature: gene Location: 2723592-2727443 bp Feature: gene Location: 2727520-2728329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons