myRT

myRT report for GCA_006788865.1_ASM678886v1

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Seq: VFXI01000004.1 (163366 bp)
Overview 1 RT 1: 2-2067 bp 2 RT 2: 50267-53238 bp 3 RT 3: 62680-66340 bp Neighborhood of RT #1 [2, 2069] RVT-UG4 RVT-UG4 PRK15211 Neighborhood of RT #2 [50267, 53273] GIIM RVT-GII PRK09183 COG4584 Neighborhood of RT #3 [62680, 66340] RVT-UG4 Feature: gene Location: 2-160 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5-158 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5-1 58 bp Feature: gene Location: 186-770 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 516-693 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 51 6-693 bp Feature: gene Location: 784-1365 bp Feature: gene Location: 1380-2069 bp Feature: domain Description: PRK15211 Location: 1386-2067 bp Feature: domain Description: PRK1 521 1 Location: 1 386-2067 bp Feature: gene Location: 50267-50407 bp Feature: gene Location: 50441-50752 bp Feature: domain Description: GIIM Note: maturase Location: 50447-50594 bp Feature: domain Description: GIIM Note: maturase Location: 50447-50594 bp Feature: gene Location: 50756-51676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50957-51569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50957-51 569 bp Feature: gene Location: 51781-52548 bp Feature: domain Description: PRK09183 Location: 51790-52528 bp Feature: domain Description: PRK091 83 Location: 51 790-52528 bp Feature: gene Location: 52548-53273 bp Feature: domain Description: COG4584 Location: 52563-53238 bp Feature: domain Description: COG4584 Location: 52563-53238 bp Feature: gene Location: 62680-62880 bp Feature: gene Location: 63899-64759 bp Feature: gene Location: 64764-65762 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 65112-65550 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 651 1 2-65550 bp Feature: gene Location: 65542-65745 bp Feature: gene Location: 65759-66340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK15211 (fimbrial chaperone), GIIM (pfam08388), RVT-GII, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: VFXI01000007.1 (31817 bp)
Overview 1 RT 1: 1214-3661 bp Neighborhood of RT #1 [1214, 3661] RVT-UG4 Feature: gene Location: 1214-1795 bp Feature: gene Location: 1809-2012 bp Feature: gene Location: 1792-2790 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2140-2578 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 140-2 578 bp Feature: gene Location: 2960-3181 bp Feature: gene Location: 3377-3661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: VFXI01000001.1 (2347638 bp)
Overview 1 RT 1: 201793-206616 bp Neighborhood of RT #1 [201793, 206729] RVT-UG2 CZB CZB Feature: gene Location: 201793-202059 bp Feature: gene Location: 202157-202318 bp Feature: gene Location: 202465-203751 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 202669-203458 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 202669-203 458 bp Feature: gene Location: 204998-205696 bp Feature: domain Description: CZB Location: 205370-205553 bp Feature: domain Description: CZB Location: 2053 70-205553 bp Feature: gene Location: 205893-206729 bp Feature: domain Description: CZB Location: 206415-206616 bp Feature: domain Description: CZB Location: 206415-206616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, CZB (pfam13682)