myRT

myRT report for GCA_007003005.1_ASM700300v1

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Seq: VAJG01000006.1 (131349 bp)
Overview 1 RT 1: 79371-83767 bp Neighborhood of RT #1 [79371, 83769] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 79371-79505 bp Feature: gene Location: 79527-80141 bp Feature: domain Description: GIIM Note: maturase Location: 79539-79722 bp Feature: domain Description: GIIM Note: maturase Location: 79539-79722 bp Feature: domain Description: HNHc Note: nucleases Location: 79950-80106 bp Feature: domain Description: HNHc Note: nucleases Location: 79950-801 06 bp Feature: gene Location: 80138-80602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80144-80510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801 44-8051 0 bp Feature: gene Location: 80717-81247 bp Feature: domain Description: RVT_N Location: 80786-81029 bp Feature: domain Description: RVT_N Location: 80786-81 029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81074-81242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 074-81 242 bp Feature: gene Location: 82929-83324 bp Feature: domain Description: rpsI Location: 82941-83322 bp Feature: domain Description: rpsI Location: 82941 -83322 bp Feature: gene Location: 83341-83769 bp Feature: domain Description: rplM Location: 83344-83767 bp Feature: domain Description: rplM Location: 83344-83767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)

Seq: VAJG01000008.1 (102046 bp)
Overview 1 RT 1: 10352-22149 bp Neighborhood of RT #1 [10352, 22160] PRK00062 RVT-UG2 PRK00566 rpoB Feature: gene Location: 10352-11632 bp Feature: domain Description: PRK00062 Location: 10358-11627 bp Feature: domain Description: PRK00062 Location: 10358-1162 7 bp Feature: gene Location: 11699-11881 bp Feature: gene Location: 11884-13194 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12079-12898 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12 079-12 898 bp Feature: gene Location: 13589-17872 bp Feature: domain Description: PRK00566 Location: 13625-17714 bp Feature: domain Description: PRK00566 Location: 1362 5-17714 bp Feature: gene Location: 18135-22160 bp Feature: domain Description: rpoB Location: 18159-22149 bp Feature: domain Description: rpoB Location: 18159-2 2 149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), rpoB (TIGR02013)