myRT

myRT report for GCA_007003115.1_ASM700311v1

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Seq: VAJC01000006.1 (102044 bp)
Overview 1 RT 1: 79885-91688 bp Neighborhood of RT #1 [79885, 91693] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 79885-83910 bp Feature: domain Description: rpoB Location: 79909-83899 bp Feature: domain Description: rpoB Location: 79909-83899 bp Feature: gene Location: 84173-88456 bp Feature: domain Description: PRK00566 Location: 84209-88298 bp Feature: domain Description: PRK00566 Location: 84209-88298 bp Feature: gene Location: 88851-90161 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89046-89865 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89046-89865 bp Feature: gene Location: 90164-90346 bp Feature: gene Location: 90413-91693 bp Feature: domain Description: PRK00062 Location: 90419-91688 bp Feature: domain Description: PRK00062 Location: 9041 9-91 688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)

Seq: VAJC01000005.1 (131349 bp)
Overview 1 RT 1: 47581-51979 bp Neighborhood of RT #1 [47581, 51979] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 47581-48009 bp Feature: domain Description: rplM Location: 47584-48007 bp Feature: domain Description: rplM Location: 47584-48007 bp Feature: gene Location: 48026-48421 bp Feature: domain Description: rpsI Location: 48038-48419 bp Feature: domain Description: rpsI Location: 48038-48419 bp Feature: gene Location: 50103-50633 bp Feature: domain Description: RVT_N Location: 50172-50415 bp Feature: domain Description: RVT_N Location: 50172 -50415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50460-50628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50460-5062 8 bp Feature: gene Location: 50748-51212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50754-51120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50754-5112 0 bp Feature: gene Location: 51209-51823 bp Feature: domain Description: GIIM Note: maturase Location: 51221-51404 bp Feature: domain Description: GIIM Note: maturase Location: 512 2 1-51404 bp Feature: domain Description: HNHc Note: nucleases Location: 51632-51788 bp Feature: domain Description: HNHc Note: nucleases Location: 51632 -51788 bp Feature: gene Location: 51845-51979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)