myRT

myRT report for GCA_007003125.1_ASM700312v1

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Seq: VAJA01000005.1 (131665 bp)
Overview 1 RT 1: 47573-51971 bp Neighborhood of RT #1 [47573, 51971] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 47573-48001 bp Feature: domain Description: rplM Location: 47576-47999 bp Feature: domain Description: rplM Location: 47576-47999 bp Feature: gene Location: 48018-48413 bp Feature: domain Description: rpsI Location: 48030-48411 bp Feature: domain Description: rpsI Location: 48030-4841 1 bp Feature: gene Location: 50095-50625 bp Feature: domain Description: RVT_N Location: 50164-50407 bp Feature: domain Description: RVT_N Location: 501 64-50407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50452-50620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50452-50620 bp Feature: gene Location: 50740-51204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50746-51112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50746-51 1 1 2 bp Feature: gene Location: 51201-51815 bp Feature: domain Description: GIIM Note: maturase Location: 51213-51396 bp Feature: domain Description: GIIM Note: maturase Location: 51 21 3-51 396 bp Feature: domain Description: HNHc Note: nucleases Location: 51624-51780 bp Feature: domain Description: HNHc Note: nucleases Location: 51 624-51 780 bp Feature: gene Location: 51837-51971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: VAJA01000006.1 (107450 bp)
Overview 1 RT 1: 85291-97094 bp Neighborhood of RT #1 [85291, 97099] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 85291-89316 bp Feature: domain Description: rpoB Location: 85315-89305 bp Feature: domain Description: rpoB Location: 85315-89305 bp Feature: gene Location: 89579-93862 bp Feature: domain Description: PRK00566 Location: 89615-93704 bp Feature: domain Description: PRK00566 Location: 89615-93704 bp Feature: gene Location: 94257-95567 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 94452-95271 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 94452 -952 71 bp Feature: gene Location: 95570-95752 bp Feature: gene Location: 95819-97099 bp Feature: domain Description: PRK00062 Location: 95825-97094 bp Feature: domain Description: PRK00062 Location: 9582 5-97094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)