myRT

myRT report for GCA_007003215.1_ASM700321v1

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Seq: VAIX01000003.1 (181452 bp)
Overview 1 RT 1: 97684-102082 bp Neighborhood of RT #1 [97684, 102082] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 97684-98112 bp Feature: domain Description: rplM Location: 97687-98110 bp Feature: domain Description: rplM Location: 97687-981 1 0 bp Feature: gene Location: 98129-98524 bp Feature: domain Description: rpsI Location: 98141-98522 bp Feature: domain Description: rpsI Location: 981 41 -98522 bp Feature: gene Location: 100206-100736 bp Feature: domain Description: RVT_N Location: 100275-100518 bp Feature: domain Description: RVT_N Location: 1 00275-1 0051 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100563-100731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00563-1 00731 bp Feature: gene Location: 100851-101315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100857-101223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00857-1 01 223 bp Feature: gene Location: 101312-101926 bp Feature: domain Description: GIIM Note: maturase Location: 101324-101507 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 324-1 01 507 bp Feature: domain Description: HNHc Note: nucleases Location: 101735-101891 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 735-1 01 891 bp Feature: gene Location: 101948-102082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: VAIX01000007.1 (105313 bp)
Overview 1 RT 1: 83195-94998 bp Neighborhood of RT #1 [83195, 95003] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 83195-87220 bp Feature: domain Description: rpoB Location: 83219-87209 bp Feature: domain Description: rpoB Location: 832 19-872 09 bp Feature: gene Location: 87483-91766 bp Feature: domain Description: PRK00566 Location: 87519-91608 bp Feature: domain Description: PRK00566 Location: 87519-91608 bp Feature: gene Location: 92161-93471 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 92356-93175 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 92 356-93175 bp Feature: gene Location: 93474-93656 bp Feature: gene Location: 93723-95003 bp Feature: domain Description: PRK00062 Location: 93729-94998 bp Feature: domain Description: PRK00062 Location: 9372 9-94998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)