myRT

myRT report for GCA_007003235.1_ASM700323v1

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Seq: VAIW01000008.1 (102046 bp)
Overview 1 RT 1: 79887-91690 bp Neighborhood of RT #1 [79887, 91695] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 79887-83912 bp Feature: domain Description: rpoB Location: 79911-83901 bp Feature: domain Description: rpoB Location: 7991 1 -83901 bp Feature: gene Location: 84175-88458 bp Feature: domain Description: PRK00566 Location: 84211-88300 bp Feature: domain Description: PRK00566 Location: 8421 1 -88300 bp Feature: gene Location: 88853-90163 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89048-89867 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89048-89867 bp Feature: gene Location: 90166-90348 bp Feature: gene Location: 90415-91695 bp Feature: domain Description: PRK00062 Location: 90421-91690 bp Feature: domain Description: PRK00062 Location: 90421 -91 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)

Seq: VAIW01000004.1 (131341 bp)
Overview 1 RT 1: 47573-51971 bp Neighborhood of RT #1 [47573, 51971] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 47573-48001 bp Feature: domain Description: rplM Location: 47576-47999 bp Feature: domain Description: rplM Location: 47576-47999 bp Feature: gene Location: 48018-48413 bp Feature: domain Description: rpsI Location: 48030-48411 bp Feature: domain Description: rpsI Location: 48030-48411 bp Feature: gene Location: 50095-50625 bp Feature: domain Description: RVT_N Location: 50164-50407 bp Feature: domain Description: RVT_N Location: 50164-50407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50452-50620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50452 -5062 0 bp Feature: gene Location: 50740-51204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50746-51112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50746-51112 bp Feature: gene Location: 51201-51815 bp Feature: domain Description: GIIM Note: maturase Location: 51213-51396 bp Feature: domain Description: GIIM Note: maturase Location: 512 13-51396 bp Feature: domain Description: HNHc Note: nucleases Location: 51624-51780 bp Feature: domain Description: HNHc Note: nucleases Location: 5162 4-51780 bp Feature: gene Location: 51837-51971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)