myRT

myRT report for GCA_007003335.1_ASM700333v1

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Seq: VAIQ01000005.1 (131349 bp)
Overview 1 RT 1: 47581-51979 bp Neighborhood of RT #1 [47581, 51979] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 47581-48009 bp Feature: domain Description: rplM Location: 47584-48007 bp Feature: domain Description: rplM Location: 47584-48007 bp Feature: gene Location: 48026-48421 bp Feature: domain Description: rpsI Location: 48038-48419 bp Feature: domain Description: rpsI Location: 48038-4841 9 bp Feature: gene Location: 50103-50633 bp Feature: domain Description: RVT_N Location: 50172-50415 bp Feature: domain Description: RVT_N Location: 501 72-5041 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50460-50628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50460-50628 bp Feature: gene Location: 50748-51212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50754-51120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50754-51 1 20 bp Feature: gene Location: 51209-51823 bp Feature: domain Description: GIIM Note: maturase Location: 51221-51404 bp Feature: domain Description: GIIM Note: maturase Location: 51 221 -51 404 bp Feature: domain Description: HNHc Note: nucleases Location: 51632-51788 bp Feature: domain Description: HNHc Note: nucleases Location: 51 632-51 788 bp Feature: gene Location: 51845-51979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: VAIQ01000006.1 (102046 bp)
Overview 1 RT 1: 79887-91690 bp Neighborhood of RT #1 [79887, 91695] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 79887-83912 bp Feature: domain Description: rpoB Location: 79911-83901 bp Feature: domain Description: rpoB Location: 79911-83901 bp Feature: gene Location: 84175-88458 bp Feature: domain Description: PRK00566 Location: 84211-88300 bp Feature: domain Description: PRK00566 Location: 842 11-88300 bp Feature: gene Location: 88853-90163 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89048-89867 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89048-89867 bp Feature: gene Location: 90166-90348 bp Feature: gene Location: 90415-91695 bp Feature: domain Description: PRK00062 Location: 90421-91690 bp Feature: domain Description: PRK00062 Location: 9042 1-91690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)