myRT

myRT report for GCA_007050945.1_ASM705094v1

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Seq: SPQF01000057.1 (15289 bp)
Overview 1 RT 1: 166-4550 bp Neighborhood of RT #1 [166, 4550] DDE_Tnp_1_4 DDE_Tnp_1_4 RVT-GII GIIM Transposase_mut Feature: gene Location: 166-1155 bp Feature: domain Description: DDE_Tnp_1_4 Location: 193-1144 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 1 93-1 1 44 bp Feature: gene Location: 1159-1485 bp Feature: domain Description: DDE_Tnp_1_4 Location: 1162-1450 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 1 1 62-1 450 bp Feature: gene Location: 1745-2746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1751-2315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 751 -231 5 bp Feature: domain Description: GIIM Note: maturase Location: 2402-2612 bp Feature: domain Description: GIIM Note: maturase Location: 2402-261 2 bp Feature: gene Location: 2962-4119 bp Feature: domain Description: Transposase_mut Location: 2968-4018 bp Feature: domain Description: Transposase_mut Location: 2968-401 8 bp Feature: gene Location: 4386-4550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872)

Seq: SPQF01000087.1 (3873 bp)
Overview 1 RT 1: 2-2340 bp Neighborhood of RT #1 [2, 2340] RVT-GII GIIM Feature: gene Location: 2-580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-161 bp Feature: domain Description: GIIM Note: maturase Location: 230-452 bp Feature: domain Description: GIIM Note: maturase Location: 2 30-452 bp Feature: gene Location: 805-1356 bp Feature: gene Location: 1633-2340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SPQF01000074.1 (7624 bp)
Overview 1 RT 1: 3965-7262 bp Neighborhood of RT #1 [3965, 7262] Transposase_20 DDE_3 RVT-GII GIIM Feature: gene Location: 3965-4756 bp Feature: domain Description: Transposase_20 Location: 4352-4607 bp Feature: domain Description: Transposase_20 Location: 43 52-4607 bp Feature: gene Location: 5057-5323 bp Feature: domain Description: DDE_3 Location: 5069-5204 bp Feature: domain Description: DDE_3 Location: 5069-5204 bp Feature: gene Location: 5500-6930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5821-6505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5821-6505 bp Feature: domain Description: GIIM Note: maturase Location: 6574-6808 bp Feature: domain Description: GIIM Note: maturase Location: 6574-6808 bp Feature: gene Location: 6972-7262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: SPQF01000061.1 (13174 bp)
Overview 1 RT 1: 1-2652 bp Neighborhood of RT #1 [1, 2652] RVT-GII Feature: gene Location: 1-609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-4 96 bp Feature: gene Location: 634-1515 bp Feature: gene Location: 2488-2652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SPQF01000082.1 (4612 bp)
Overview 1 RT 1: 316-3667 bp Neighborhood of RT #1 [316, 3684] Tas RVT-GII GIIM RVT-GII DDE_Tnp_4 Feature: gene Location: 316-849 bp Feature: gene Location: 849-1022 bp Feature: domain Description: Tas Location: 906-1005 bp Feature: domain Description: Tas Location: 906-1005 bp Feature: gene Location: 1191-2051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1203-1620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1203-1620 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1914 bp Feature: domain Description: GIIM Note: maturase Location: 1692-1914 bp Feature: gene Location: 2060-2656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2396-2615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2396-2615 bp Feature: gene Location: 3118-3684 bp Feature: domain Description: DDE_Tnp_4 Location: 3238-3667 bp Feature: domain Description: DDE_Tnp_4 Location: 3238-3667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tas (COG0667), RVT-GII, GIIM (pfam08388), DDE_Tnp_4 (pfam13359)