myRT

myRT report for GCA_007095785.1_ASM709578v1

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Seq: SFBL01000156.1 (41322 bp)
Overview 1 RT 1: 33172-35784 bp Neighborhood of RT #1 [33172, 35784] YfmG RVT-DGRs Avd_like Feature: gene Location: 33172-33525 bp Feature: gene Location: 33781-33924 bp Feature: domain Description: YfmG Location: 33799-33907 bp Feature: domain Description: YfmG Location: 33799-33907 bp Feature: gene Location: 33931-34989 bp Ori: TRU23164.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34144-34783 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 341 44-34783 bp Feature: gene Location: 35015-35368 bp Ori: TRU23165.1 Gene: avd Feature: domain Description: Avd_like Location: 35033-35339 bp Feature: domain Description: Avd_like Location: 35033-35339 bp Feature: gene Location: 35545-35784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)

Seq: SFBL01000029.1 (20369 bp)
Overview 1 RT 1: 1-4105 bp Neighborhood of RT #1 [1, 4164] RVT-CRISPR Cas_Cas1 Phage_int_SAM_1 INT_C_like_5 InsQ Feature: gene Location: 1-1700 bp Ori: TRU28925.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 190-799 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 190-799 bp Feature: domain Description: Cas_Cas1 Location: 985-1696 bp Feature: domain Description: Cas_Cas1 Location: 985-1696 bp Feature: gene Location: 1802-2890 bp Ori: TRU28942.1 Feature: domain Description: Phage_int_SAM_1 Location: 2012-2243 bp Feature: domain Description: Phage_int_SAM_1 Location: 2 012 -2 2 43 bp Feature: domain Description: INT_C_like_5 Location: 2333-2846 bp Feature: domain Description: INT_C_like_5 Location: 2 333-2 846 bp Feature: gene Location: 2983-4164 bp Ori: TRU28926.1 Feature: domain Description: InsQ Location: 2989-4105 bp Feature: domain Description: InsQ Location: 2 989-4105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867), Phage_int_SAM_1 (pfam02899), INT_C_like_5 (cd01195), InsQ (COG0675)

Seq: SFBL01000164.1 (17928 bp)
Overview 1 RT 1: 3911-9174 bp Neighborhood of RT #1 [3911, 9174] Nterm_to_SelD RVT-UG19 NERD DEXXQc_Helz-like Feature: gene Location: 3911-5044 bp Ori: TRU22751.1 Feature: domain Description: Nterm_to_SelD Location: 3932-5033 bp Feature: domain Description: Nterm_to_SelD Location: 3 93 2-503 3 bp Feature: gene Location: 5031-5306 bp Feature: gene Location: 5329-7008 bp Ori: TRU22753.1 Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 5719-6223 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 5719-6223 bp Feature: gene Location: 7042-8664 bp Ori: TRU22754.1 Feature: domain Description: NERD Location: 7087-7375 bp Feature: domain Description: NERD Location: 7087-73 75 bp Feature: domain Description: DEXXQc_Helz-like Location: 7702-7966 bp Feature: domain Description: DEXXQc_Helz-like Location: 7702-7966 bp Feature: gene Location: 8815-9174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nterm_to_SelD (TIGR03169), RVT-UG19, NERD (pfam08378), DEXXQc_Helz-like (cd18038)