myRT

myRT report for GCA_007097345.1_ASM709734v1

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Seq: VJZO01000024.1 (61628 bp)
Overview 1 RT 1: 56084-60939 bp Neighborhood of RT #1 [56084, 60989] AmyAc_SI_OligoGlu_DGase MannoseP_isomer MannoseP_isomer RVT-GII GIIM couple_hipB Feature: gene Location: 56084-57712 bp Feature: domain Description: AmyAc_SI_OligoGlu_DGase Location: 56186-57506 bp Feature: domain Description: AmyAc_SI_OligoGlu_DGase Location: 561 86-57506 bp Feature: gene Location: 57766-58281 bp Feature: domain Description: MannoseP_isomer Location: 57805-57913 bp Feature: domain Description: MannoseP_isomer Location: 57805-5791 3 bp Feature: domain Description: MannoseP_isomer Location: 57913-58267 bp Feature: domain Description: MannoseP_isomer Location: 5791 3-58267 bp Feature: gene Location: 58898-60316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59249-59867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59249-59867 bp Feature: domain Description: GIIM Note: maturase Location: 59927-60155 bp Feature: domain Description: GIIM Note: maturase Location: 59927-601 55 bp Feature: gene Location: 60654-60989 bp Feature: domain Description: couple_hipB Location: 60771-60939 bp Feature: domain Description: couple_hipB Location: 60771 -60939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmyAc_SI_OligoGlu_DGase (cd11333), MannoseP_isomer (pfam01050), RVT-GII, GIIM (pfam08388), couple_hipB (TIGR03070)

Seq: VJZO01000070.1 (3695 bp)
Overview 1 RT 1: 109-3437 bp Neighborhood of RT #1 [109, 3469] TPR RVT-GII GIIM HTH_XRE Gp49 Feature: gene Location: 109-726 bp Feature: domain Description: TPR Location: 244-487 bp Feature: domain Description: TPR Location: 2 44-487 bp Feature: gene Location: 1045-1233 bp Feature: gene Location: 1425-2747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1620-2235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 0-2 2 35 bp Feature: domain Description: GIIM Note: maturase Location: 2307-2529 bp Feature: domain Description: GIIM Note: maturase Location: 2 307-2 52 9 bp Feature: gene Location: 2805-3110 bp Feature: domain Description: HTH_XRE Location: 2928-3069 bp Feature: domain Description: HTH_XRE Location: 2 92 8-3069 bp Feature: gene Location: 3116-3469 bp Feature: domain Description: Gp49 Location: 3170-3437 bp Feature: domain Description: Gp49 Location: 3170-3437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), Gp49 (pfam05973)

Seq: VJZO01000009.1 (134773 bp)
Overview 1 RT 1: 111900-117032 bp Neighborhood of RT #1 [111900, 117085] YceI RVT-Retrons PRK11263 S2P-M50_SpoIVFB_CBS CBS_pair_peptidase_M50 Feature: gene Location: 111900-112046 bp Feature: gene Location: 112212-112784 bp Feature: domain Description: YceI Location: 112254-112782 bp Feature: domain Description: YceI Location: 112254-112782 bp Feature: gene Location: 113258-114319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113483-114035 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113 483 -11403 5 bp Feature: gene Location: 114841-116001 bp Feature: domain Description: PRK11263 Location: 114883-115987 bp Feature: domain Description: PRK11263 Location: 114883 -115987 bp Feature: gene Location: 115976-117085 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 116000-116651 bp Feature: domain Description: S2P-M50_SpoIVFB_CBS Location: 116000-116651 bp Feature: domain Description: CBS_pair_peptidase_M50 Location: 116696-117032 bp Feature: domain Description: CBS_pair_peptidase_M50 Location: 116696-11703 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YceI (smart00867), RVT-Retrons, PRK11263 (cardiolipin synthase ClsB), S2P-M50_SpoIVFB_CBS (cd06164), CBS_pair_peptidase_M50 (cd04801)

Seq: VJZO01000078.1 (1835 bp)
Overview 1 RT 1: 2-1612 bp Neighborhood of RT #1 [2, 1818] RVT-GII GIIM Feature: gene Location: 2-142 bp Feature: gene Location: 502-1818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697-1312 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1612 bp Feature: domain Description: GIIM Note: maturase Location: 1384 -1612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VJZO01000080.1 (1548 bp)
Overview 1 RT 1: 100-1282 bp Neighborhood of RT #1 [100, 1347] RVT-GII GIIM Feature: gene Location: 100-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-982 bp Feature: domain Description: GIIM Note: maturase Location: 1093-1282 bp Feature: domain Description: GIIM Note: maturase Location: 1093-1282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VJZO01000015.1 (86568 bp)
Overview 1 RT 1: 82598-86386 bp Neighborhood of RT #1 [82598, 86478] recomb_XerD RimL RVT-GII GIIM HAD_BPGM_like Feature: gene Location: 82598-82909 bp Feature: domain Description: recomb_XerD Location: 82631-82886 bp Feature: domain Description: recomb_XerD Location: 826 31-82886 bp Feature: gene Location: 83062-83625 bp Feature: domain Description: RimL Location: 83098-83620 bp Feature: domain Description: RimL Location: 83098-836 20 bp Feature: gene Location: 83820-85115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84015-84630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84015-846 30 bp Feature: domain Description: GIIM Note: maturase Location: 84702-84915 bp Feature: domain Description: GIIM Note: maturase Location: 84702-84915 bp Feature: gene Location: 85306-85494 bp Feature: gene Location: 85831-86478 bp Feature: domain Description: HAD_BPGM_like Location: 85846-86386 bp Feature: domain Description: HAD_BPGM_like Location: 85846 -86 386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recomb_XerD (TIGR02225), RimL (COG1670), RVT-GII, GIIM (pfam08388), HAD_BPGM_like (cd07526)

Seq: VJZO01000008.1 (143102 bp)
Overview 1 RT 1: 7206-15458 bp Neighborhood of RT #1 [7206, 15529] DUF2779 RVT-UG8 RVT-UG3 T5orf172 Feature: gene Location: 7206-7397 bp Feature: gene Location: 7502-9466 bp Feature: domain Description: DUF2779 Location: 8633-9071 bp Feature: domain Description: DUF27 7 9 Location: 8633-907 1 bp Feature: gene Location: 9759-11951 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10383-10833 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10383-10833 bp Feature: gene Location: 11951-13399 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12383-12914 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12383-12914 bp Feature: gene Location: 13438-14286 bp Feature: gene Location: 14330-15529 bp Feature: domain Description: T5orf172 Location: 15188-15458 bp Feature: domain Description: T5orf17 2 Location: 15188-15458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2779 (pfam11074), RVT-UG8, RVT-UG3, T5orf172 (smart00974)