myRT

myRT report for GCA_007097645.1_ASM709764v1

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Seq: VJZU01000021.1 (80446 bp)
Overview 1 RT 1: 74617-79769 bp Neighborhood of RT #1 [74617, 79930] DUF5123 DUF5123 Pgu1 Beta_helix RVT-GII GIIM Feature: gene Location: 74617-76257 bp Feature: domain Description: DUF5123 Location: 75586-75721 bp Feature: domain Description: DUF51 23 Location: 75586-75721 bp Feature: domain Description: DUF5123 Location: 75823-76249 bp Feature: domain Description: DUF51 23 Location: 75823-76249 bp Feature: gene Location: 76378-77955 bp Feature: domain Description: Pgu1 Location: 76540-77575 bp Feature: domain Description: Pgu1 Location: 76540-77575 bp Feature: domain Description: Beta_helix Location: 77755-77905 bp Feature: domain Description: Beta_helix Location: 77755-77905 bp Feature: gene Location: 78524-79930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78866-79484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78866-79484 bp Feature: domain Description: GIIM Note: maturase Location: 79538-79769 bp Feature: domain Description: GIIM Note: maturase Location: 79538-79769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VJZU01000005.1 (525070 bp)
Overview 1 RT 1: 282267-294684 bp Neighborhood of RT #1 [282267, 294815] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 282267-282440 bp Feature: gene Location: 283376-285583 bp Feature: gene Location: 285790-286920 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 286111-286657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 86111-2 86657 bp Feature: gene Location: 286950-292919 bp Feature: domain Description: DUF4011 Location: 288180-288693 bp Feature: domain Description: DUF4011 Location: 2 88180-2 88693 bp Feature: domain Description: DEXXQc_SF1 Location: 289032-289656 bp Feature: domain Description: DEXXQc_SF1 Location: 2 89032 -2 89656 bp Feature: domain Description: DEXXQc_SF1 Location: 290460-291219 bp Feature: domain Description: DEXXQc_SF1 Location: 2 90460-2 912 19 bp Feature: domain Description: TIGR00376 Location: 291348-291738 bp Feature: domain Description: TIGR00376 Location: 2 91348-2 91738 bp Feature: domain Description: MTES_1575 Location: 291891-292176 bp Feature: domain Description: MTES_1575 Location: 2 91891-2 92 176 bp Feature: domain Description: DUF3320 Location: 292434-292569 bp Feature: domain Description: DUF332 0 Location: 2 92 434-2 92 569 bp Feature: gene Location: 293016-294815 bp Feature: domain Description: rpsA Location: 293085-294684 bp Feature: domain Description: rpsA Location: 2 93085-2 94684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VJZU01000001.1 (886905 bp)
Overview 1 RT 1: 819357-826676 bp Neighborhood of RT #1 [819357, 826882] GH18_EndoS-like DUF1735 Laminin_G_3 RVT-GII GIIM COG3943 VirE_N COG5545 Feature: gene Location: 819357-820478 bp Feature: domain Description: GH18_EndoS-like Location: 819549-820401 bp Feature: domain Description: GH18_EndoS-like Location: 819549-820401 bp Feature: gene Location: 820511-821650 bp Feature: domain Description: DUF1735 Location: 820604-820943 bp Feature: domain Description: DUF173 5 Location: 820604-820943 bp Feature: domain Description: Laminin_G_3 Location: 821024-821474 bp Feature: domain Description: Laminin_G_3 Location: 821024-821474 bp Feature: gene Location: 822225-823760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822567-823185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 822567-823 185 bp Feature: domain Description: GIIM Note: maturase Location: 823239-823470 bp Feature: domain Description: GIIM Note: maturase Location: 823 23 9-823 470 bp Feature: gene Location: 823953-824603 bp Feature: domain Description: COG3943 Location: 824025-824400 bp Feature: domain Description: COG3 943 Location: 824025-824400 bp Feature: gene Location: 824798-826882 bp Feature: domain Description: VirE_N Location: 824960-825353 bp Feature: domain Description: VirE_N Location: 824960-8253 53 bp Feature: domain Description: COG5545 Location: 825980-826676 bp Feature: domain Description: COG5545 Location: 825980-826676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VJZU01000031.1 (2499 bp)
Overview 1 RT 1: 1-2140 bp Neighborhood of RT #1 [1, 2140] Phage_int_SAM_5 INTN1_C_like RVT-Retrons Feature: gene Location: 1-990 bp Feature: domain Description: Phage_int_SAM_5 Location: 103-409 bp Feature: domain Description: Phage_int_SAM_5 Location: 103-4 09 bp Feature: domain Description: INTN1_C_like Location: 460-949 bp Feature: domain Description: INTN1_C_like Location: 4 60-94 9 bp Feature: gene Location: 999-1847 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1161-1683 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1161-1683 bp Feature: gene Location: 1871-2140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT