myRT

myRT report for GCA_007108085.1_ASM710808v1

Download annotations/find similar RTs

Seq: CP041530.1 (74353 bp)
Overview 1 RT 1: 51057-54697 bp Neighborhood of RT #1 [51057, 54702] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 51057-51197 bp Feature: gene Location: 51531-51740 bp Feature: gene Location: 51875-53776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52142-52973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521 42-52973 bp Feature: domain Description: Intron_maturas2 Location: 53087-53345 bp Feature: domain Description: Intron_maturas2 Location: 53087-53345 bp Feature: domain Description: HNHc Note: nucleases Location: 53519-53681 bp Feature: domain Description: HNHc Note: nucleases Location: 5351 9-53681 bp Feature: gene Location: 53971-54411 bp Feature: domain Description: PRK13732 Location: 53977-54409 bp Feature: domain Description: PRK1 3732 Location: 53977-54409 bp Feature: gene Location: 54469-54702 bp Feature: domain Description: DUF905 Location: 54499-54697 bp Feature: domain Description: DUF905 Location: 54499-54697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CP041531.1 (43818 bp)
Overview 1 RT 1: 10793-14906 bp Neighborhood of RT #1 [10793, 14906] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 10793-11026 bp Feature: domain Description: DUF905 Location: 10823-11021 bp Feature: domain Description: DUF905 Location: 1082 3-1102 1 bp Feature: gene Location: 11083-11523 bp Feature: domain Description: PRK13732 Location: 11089-11521 bp Feature: domain Description: PRK13732 Location: 11089-1152 1 bp Feature: gene Location: 11718-13619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11985-12816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11985-12 816 bp Feature: domain Description: Intron_maturas2 Location: 12930-13188 bp Feature: domain Description: Intron_maturas2 Location: 12 930-13188 bp Feature: domain Description: HNHc Note: nucleases Location: 13362-13524 bp Feature: domain Description: HNHc Note: nucleases Location: 13362 -1352 4 bp Feature: gene Location: 14336-14593 bp Feature: gene Location: 14640-14906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP041529.1 (5095948 bp)
Overview 1 RT 1: 249658-255311 bp 2 RT 2: 3462201-3466587 bp Neighborhood of RT #1 [249658, 255430] SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N 7tmA_amine_R-like Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Neighborhood of RT #2 [3462201, 3466587] RVT-Retrons Feature: gene Location: 249658-249798 bp Feature: gene Location: 249811-250362 bp Feature: domain Description: SLATT_5 Location: 249817-250333 bp Feature: domain Description: SLATT_5 Location: 249817-2503 3 3 bp Feature: gene Location: 250340-251710 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 250568-251174 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 250568-251174 bp Feature: gene Location: 251823-252407 bp Feature: domain Description: Caudo_TAP Location: 252039-252396 bp Feature: domain Description: Caudo_TAP Location: 25203 9-2523 96 bp Feature: gene Location: 252407-255430 bp Feature: domain Description: phage_tail_N Location: 252410-252809 bp Feature: domain Description: phage_tail_N Location: 252410-252809 bp Feature: domain Description: 7tmA_amine_R-like Location: 253316-253733 bp Feature: domain Description: 7tmA_amine_R-like Location: 253 3 16-253 73 3 bp Feature: domain Description: Phage_fiber_2 Location: 253793-253913 bp Feature: domain Description: Phage_fiber_2 Location: 253 793 -253 913 bp Feature: domain Description: Phage_fiber_2 Location: 253925-254045 bp Feature: domain Description: Phage_fiber_2 Location: 253 925-254045 bp Feature: domain Description: Collar Location: 254801-254939 bp Feature: domain Description: Collar Location: 254801-25493 9 bp Feature: domain Description: Phage_fiber Location: 254990-255029 bp Feature: domain Description: Phage_fiber Location: 254990-255029 bp Feature: domain Description: Phage_fiber Location: 255086-255125 bp Feature: domain Description: Phage_fiber Location: 255086-255125 bp Feature: domain Description: Phage_fiber Location: 255233-255272 bp Feature: domain Description: Phage_fiber Location: 25523 3 -255272 bp Feature: domain Description: Phage_fiber Location: 255278-255311 bp Feature: domain Description: Phage_fiber Location: 255278-2553 11 bp Feature: gene Location: 3462201-3463340 bp Feature: gene Location: 3463386-3463553 bp Feature: gene Location: 3463575-3465347 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3463734-3464352 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 463 73 4-3 4643 52 bp Feature: gene Location: 3465903-3466142 bp Feature: gene Location: 3466357-3466587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), RVT-Retrons