myRT

myRT report for GCA_007109365.1_ASM710936v1

Download annotations/find similar RTs

Seq: CP041565.1 (97001 bp)
Overview 1 RT 1: 27277-31407 bp Neighborhood of RT #1 [27277, 31529] PRK13732 RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 27277-27804 bp Feature: domain Description: PRK13732 Location: 27280-27802 bp Feature: domain Description: PRK1 3732 Location: 27280-27802 bp Feature: gene Location: 27938-28399 bp Feature: gene Location: 28973-30640 bp Feature: domain Description: RVT_N Location: 29021-29258 bp Feature: domain Description: RVT_N Location: 29021 -29258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29309-29951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29309-29951 bp Feature: domain Description: GIIM Note: maturase Location: 30002-30236 bp Feature: domain Description: GIIM Note: maturase Location: 30002-30236 bp Feature: domain Description: HNHc Note: nucleases Location: 30446-30605 bp Feature: domain Description: HNHc Note: nucleases Location: 30446-30605 bp Feature: gene Location: 30753-31055 bp Feature: gene Location: 31107-31529 bp Feature: domain Description: DUF1380 Location: 31110-31407 bp Feature: domain Description: DUF1 380 Location: 31 1 1 0-31 407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: CP041564.1 (130956 bp)
Overview 1 RT 1: 8201-13185 bp 2 RT 2: 55848-58523 bp 3 RT 3: 105368-108841 bp Neighborhood of RT #1 [8201, 13185] DUF3560 AdoMet_MTases RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [55848, 58531] InsE PHA02517 RVT-GII PRK10173 PRK10173 Neighborhood of RT #3 [105368, 108879] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 8201-9562 bp Feature: domain Description: DUF3560 Location: 8468-8825 bp Feature: domain Description: DUF3560 Location: 8468-882 5 bp Feature: gene Location: 9608-10171 bp Feature: domain Description: AdoMet_MTases Location: 9770-10070 bp Feature: domain Description: AdoMet_MTases Location: 9770-10070 bp Feature: gene Location: 10546-12213 bp Feature: domain Description: RVT_N Location: 10594-10831 bp Feature: domain Description: RVT_N Location: 10594-10831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10882-11524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10882 -1152 4 bp Feature: domain Description: GIIM Note: maturase Location: 11575-11809 bp Feature: domain Description: GIIM Note: maturase Location: 11575-11809 bp Feature: domain Description: HNHc Note: nucleases Location: 12019-12178 bp Feature: domain Description: HNHc Note: nucleases Location: 12 019-12 178 bp Feature: gene Location: 12493-12675 bp Feature: gene Location: 12871-13185 bp Feature: gene Location: 55848-56174 bp Feature: domain Description: InsE Location: 55851-56172 bp Feature: domain Description: InsE Location: 55851-56172 bp Feature: gene Location: 56174-56653 bp Feature: domain Description: PHA02517 Location: 56234-56588 bp Feature: domain Description: PHA02 517 Location: 562 34-56588 bp Feature: gene Location: 57245-57748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57518-57587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57518-57587 bp Feature: gene Location: 57787-58098 bp Feature: domain Description: PRK10173 Location: 57790-58009 bp Feature: domain Description: PRK10173 Location: 57790-58009 bp Feature: gene Location: 58082-58531 bp Feature: domain Description: PRK10173 Location: 58085-58523 bp Feature: domain Description: PRK10173 Location: 58085-5852 3 bp Feature: gene Location: 105368-105529 bp Feature: gene Location: 105577-105858 bp Feature: domain Description: PHA02517 Location: 105583-105793 bp Feature: domain Description: PHA02 517 Location: 105583-105793 bp Feature: gene Location: 106450-107973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106723-107455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10672 3-107455 bp Feature: domain Description: GIIM Note: maturase Location: 107530-107728 bp Feature: domain Description: GIIM Note: maturase Location: 107530-10772 8 bp Feature: gene Location: 108090-108446 bp Feature: domain Description: PHA02517 Location: 108093-108402 bp Feature: domain Description: PHA02 517 Location: 108093-108402 bp Feature: gene Location: 108475-108879 bp Feature: domain Description: InsE Location: 108505-108841 bp Feature: domain Description: InsE Location: 108505-108841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3560 (pfam12083), AdoMet_MTases (cl17173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: CP041563.1 (5047719 bp)
Overview 1 RT 1: 329982-333308 bp 2 RT 2: 4668553-4674796 bp Neighborhood of RT #1 [329982, 333308] HTH_XRE RVT-Retrons FRG Neighborhood of RT #2 [4668553, 4674933] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 329982-330374 bp Feature: gene Location: 330411-330731 bp Feature: domain Description: HTH_XRE Location: 330426-330585 bp Feature: domain Description: HTH_XRE Location: 3 3 0426-3 3 0585 bp Feature: gene Location: 330697-331647 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 330877-331420 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 3 0877-3 3 1420 bp Feature: gene Location: 331756-333120 bp Feature: domain Description: FRG Location: 332323-332608 bp Feature: domain Description: FRG Location: 3 3 23 23 -3 3 2608 bp Feature: gene Location: 333159-333308 bp Feature: gene Location: 4668553-4668819 bp Feature: domain Description: Phage_integrase Location: 4668619-4668715 bp Feature: domain Description: Phage_integrase Location: 4668619-4668715 bp Feature: gene Location: 4668902-4669372 bp Feature: gene Location: 4669719-4672928 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4670247-4670736 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4670247-467073 6 bp Feature: domain Description: nitrilase Location: 4672242-4672839 bp Feature: domain Description: nitrilase Location: 4672242-467283 9 bp Feature: gene Location: 4673223-4674026 bp Feature: domain Description: AbiEi_3_N Location: 4673256-4673517 bp Feature: domain Description: AbiEi_3 _N Location: 4673 256-4673 517 bp Feature: domain Description: AbiEi_3 Location: 4673529-4673985 bp Feature: domain Description: AbiEi_3 Location: 4673 529-4673 985 bp Feature: gene Location: 4674013-4674933 bp Feature: domain Description: AbiEii Location: 4674055-4674796 bp Feature: domain Description: AbiEii Location: 4674055-4674796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, FRG (smart00901), Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)